CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L596_g4935
(
Steinernema carpocapsae
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
L596_g4935
T341760_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L596_g4935.t1
T-box
113
300
VVLSNEKLWARFDAVGNEMVLTKKGRNPFPKFQLQISGLRPNEFYKVALSFDRTDDQRYKFNEGQMDSCGVGEPMQATEKVYHPDGIVDGMTWMQSAVKFDKLKLSNSESDPSRPCVKLLSMHKYHAVAHIYRVEGYNPVNPGIYHPDTLIASIRIPHTTFVTVTAYQNQQLTNLKICNNNYARGFRA
L596_g4935.t2
T-box
1
67
MHKYHAVAHIYRVEGYNPVNPGIYHPDTLIASIRIPHTTFVTVTAYQNQQLTNLKICNNNYARGFRA
Links
Other
T-box
family TFs
Other
Steinernema carpocapsae
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGOC_0001264301
Cylicostephanus goldi
CGOC_0001264301
N
0.789
TBX15
Bos taurus
ENSBTAG00000007767
I
0.770
ANCCAN_04327
Ancylostoma caninum
ANCCAN_04327
N
0.768
NECAME_19347
Necator americanus
NECAME_19347
N
0.765
SVUK_0001851801
Strongylus vulgaris
SVUK_0001851801
N
0.765
Alligator_sinensis_CCG010046.1
Alligator sinensis
Alligator_sinensis_CCG010046.1
N
0.759
ANCCEY_00583
Ancylostoma ceylanicum
ANCCEY_00583
N
0.744
DICVIV_10715
Dictyocaulus viviparus
DICVIV_10715
N
0.744
L892_g21790
Steinernema scapterisci
L892_g21790
N
0.742
SMTD_0001779301
Schistosoma mattheei
SMTD_0001779301
N
0.742
NBR_0001177301
Nippostrongylus brasiliensis
NBR_0001177301
N
0.740
SMUV_0000075501
Syphacia muris
SMUV_0000075501
N
0.740
ECPE_0000395601
Echinostoma caproni
ECPE_0000395601
N
0.739
SPER_0002063901
Spirometra erinaceieuropaei
SPER_0002063901
N
0.738
SPER_0003769001
Spirometra erinaceieuropaei
SPER_0003769001
N
0.738
SPER_0003779701
Spirometra erinaceieuropaei
SPER_0003779701
N
0.738
PPA14512
Pristionchus pacificus
PPA14512
N
0.737
NBR_0000542501
Nippostrongylus brasiliensis
NBR_0000542501
N
0.736
NBR_0002182001
Nippostrongylus brasiliensis
NBR_0002182001
N
0.736
ACEP16128
Atta cephalotes
ACEP16128
N
0.735
ENSOANG00000029773
Ornithorhynchus anatinus
ENSOANG00000029773
I
0.735