ENSFALG00000003118 (Ficedula albicollis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSFALG00000003118 T209483_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HOXD13
M00299_2.00 		Homo sapiens
NTTWAYDDN
NHHRTWAAN		 PBM
Barrera et al.(2016)
HOXD13_REF 		0.867 1.000
Hoxd13
M00394_2.00 		Mus musculus
NWTHRYDDN
NHHRYDAWN		 PBM
Berger et al.(2008)
Hoxd13_2356 		0.867 1.000
HOXD13
M03141_2.00 		Homo sapiens
DTTTTATKRS
SYMATAAAAH		 SELEX
Jolma et al.(2013)
HOXD13_1 		0.867 1.000
HOXD13
M03142_2.00 		Homo sapiens
BCTCGTAAAAH
DTTTTACGAGV		 SELEX
Jolma et al.(2013)
HOXD13_2 		0.867 1.000
Hoxd13
M03247_2.00 		Mus musculus
DKTTTATTRS
SYAATAAAMH		 SELEX
Jolma et al.(2013)
Hoxd13_1 		0.867 1.000
Hoxd13
M03248_2.00 		Mus musculus
DDTTTAYKAGN
NCTMRTAAAHH		 SELEX
Jolma et al.(2013)
Hoxd13_2 		0.867 1.000
HOXD13
M05122_2.00 		Homo sapiens
GKTTTATKGSS
SSCMATAAAMC		 SELEX
Yin et al.(2017)
HOXD13_eDBD_HT-SELEX_1 		0.867 1.000
HOXD13
M05123_2.00 		Homo sapiens
BCTCGTAAAMH
DKTTTACGAGV		 SELEX
Yin et al.(2017)
HOXD13_eDBD_HT-SELEX_2 		0.867 1.000
HOXD13
M10689_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXD13_Q6 		0.867 1.000
HOXD13
M05124_2.00 		Homo sapiens
DDTTTATTRBB
VVYAATAAAHH		 SELEX
Yin et al.(2017)
HOXD13_eDBD_Methyl-HT-SELEX_1 		0.867 1.000
HOXD13
M05125_2.00 		Homo sapiens
VCTCGTAAAAH
DTTTTACGAGB		 SELEX
Yin et al.(2017)
HOXD13_eDBD_Methyl-HT-SELEX_2 		0.867 1.000
HOXD13
M00295_2.00 		Homo sapiens
NTTWAYDDN
NHHRTWAAN		 PBM
Barrera et al.(2016)
HOXD13_N298S 		0.867 0.982
HOXD13
M00300_2.00 		Homo sapiens
WTTTATDR
YHATAAAW		 PBM
Barrera et al.(2016)
HOXD13_S316C 		0.867 0.982
HOXD13
M00293_2.00 		Homo sapiens
NTTWAYDDNN
NNHHRTWAAN		 PBM
Barrera et al.(2016)
HOXD13_I297V 		0.866 0.982
HOXD13
M00298_2.00 		Homo sapiens
NTTWAYDDN
NHHRTWAAN		 PBM
Barrera et al.(2016)
HOXD13_R306W 		0.859 0.982
HOXD13
M00294_2.00 		Homo sapiens
THGTWAAW
WTTWACDA		 PBM
Barrera et al.(2016)
HOXD13_I322L 		0.849 0.982
hoxd13a
M02081_2.00 		Danio rerio
WTTTATDR
YHATAAAW		 PBM
Weirauch et al.(2014)
pTH6143 		0.848 0.807
Hoxa13
M00473_2.00 		Mus musculus
NTTWAYDRN
NYHRTWAAN		 PBM
Berger et al.(2008)
Hoxa13_3126 		0.834 0.895
HOXA13
M03098_2.00 		Homo sapiens
DKTTTATKRS
SYMATAAAMH		 SELEX
Jolma et al.(2013)
HOXA13_1 		0.834 0.895
HOXA13
M03099_2.00 		Homo sapiens
NCTCGTAAAHN
NDTTTACGAGN		 SELEX
Jolma et al.(2013)
HOXA13_2 		0.834 0.895
HOXA13
M03100_2.00 		Homo sapiens
DKTTTATKRS
SYMATAAAMH		 SELEX
Jolma et al.(2013)
HOXA13_3 		0.834 0.895
HOXA13
M03101_2.00 		Homo sapiens
NCTCGTAAAAH
DTTTTACGAGN		 SELEX
Jolma et al.(2013)
HOXA13_4 		0.834 0.895
HOXA13
M04977_2.00 		Homo sapiens
DTTTTATKGGB
VCCMATAAAAH		 SELEX
Yin et al.(2017)
HOXA13_eDBD_HT-SELEX_1 		0.834 0.895
HOXA13
M04978_2.00 		Homo sapiens
NCTCGTAAAHN
NDTTTACGAGN		 SELEX
Yin et al.(2017)
HOXA13_eDBD_HT-SELEX_2 		0.834 0.895
HOXA13
M04981_2.00 		Homo sapiens
DTTTTATKRSN
NSYMATAAAAH		 SELEX
Yin et al.(2017)
HOXA13_FL_HT-SELEX_1 		0.834 0.895
HOXA13
M04982_2.00 		Homo sapiens
NCTCGTAAAWH
DWTTTACGAGN		 SELEX
Yin et al.(2017)
HOXA13_FL_HT-SELEX_2 		0.834 0.895
HOXA13
M09134_2.00 		Homo sapiens
VDTWTWATKGS
SCMATWAWAHB		 Misc
Kulakovskiy et al.(2013)
HXA13_HUMAN.H11MO.0.C 		0.834 0.895
Hoxa13
M09202_2.00 		Mus musculus
VDTWTWATKGS
SCMATWAWAHB		 Misc
Kulakovskiy et al.(2013)
HXA13_MOUSE.H11MO.0.C 		0.834 0.895
HOXA13
M10653_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA13_01 		0.834 0.895
HOXA13
M10654_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA13_02 		0.834 0.895
HOXA13
M04979_2.00 		Homo sapiens
DTTTTATTRSN
NSYAATAAAAH		 SELEX
Yin et al.(2017)
HOXA13_eDBD_Methyl-HT-SELEX_1 		0.834 0.895
HOXA13
M04980_2.00 		Homo sapiens
NCTCGTAAAHN
NDTTTACGAGN		 SELEX
Yin et al.(2017)
HOXA13_eDBD_Methyl-HT-SELEX_2 		0.834 0.895
HOXA13
M04983_2.00 		Homo sapiens
DKTTTATTGBN
NVCAATAAAMH		 SELEX
Yin et al.(2017)
HOXA13_FL_Methyl-HT-SELEX_1 		0.834 0.895
HOXA13
M04984_2.00 		Homo sapiens
NCTCGTAAAWH
DWTTTACGAGN		 SELEX
Yin et al.(2017)
HOXA13_FL_Methyl-HT-SELEX_2 		0.834 0.895
Hoxc13
M00389_2.00 		Mus musculus
NTTWAYDRNN
NNYHRTWAAN		 PBM
Berger et al.(2008)
Hoxc13_3127 		0.834 0.860
HOXC13
M03129_2.00 		Homo sapiens
NTTTTATTRS
SYAATAAAAN		 SELEX
Jolma et al.(2013)
HOXC13_1 		0.834 0.860
HOXC13
M03130_2.00 		Homo sapiens
NCTCGTAAAAH
DTTTTACGAGN		 SELEX
Jolma et al.(2013)
HOXC13_2 		0.834 0.860
HOXC13
M05072_2.00 		Homo sapiens
RKTTTATKGSN
NSCMATAAAMY		 SELEX
Yin et al.(2017)
HOXC13_eDBD_HT-SELEX_1 		0.834 0.860
HOXC13
M05073_2.00 		Homo sapiens
BCTCGTAAAMH
DKTTTACGAGV		 SELEX
Yin et al.(2017)
HOXC13_eDBD_HT-SELEX_2 		0.834 0.860
HOXC13
M10680_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXC13_Q2 		0.834 0.860
HOXC13
M05074_2.00 		Homo sapiens
BCTCGTAAAAH
DTTTTACGAGV		 SELEX
Yin et al.(2017)
HOXC13_eDBD_Methyl-HT-SELEX 		0.834 0.860
HOXB13
M02092_2.00 		Homo sapiens
NTTWAYDDNN
NNHHRTWAAN		 PBM
Weirauch et al.(2014)
pTH5808 		0.704 0.807
Hoxb13
M00505_2.00 		Mus musculus
NTTWAYDDNN
NNHHRTWAAN		 PBM
Berger et al.(2008)
Hoxb13_3479 		0.704 0.807
HOXB13
M03175_2.00 		Homo sapiens
DTTTTATKGG
CCMATAAAAH		 SELEX
Jolma et al.(2013)
HOXB13_1 		0.704 0.807
HOXB13
M03176_2.00 		Homo sapiens
BCTCGTAAAAH
DTTTTACGAGV		 SELEX
Jolma et al.(2013)
HOXB13_2 		0.704 0.807
HOXB13
M05201_2.00 		Homo sapiens
DTTTTATKGGN
NCCMATAAAAH		 SELEX
Yin et al.(2017)
HOXB13_eDBD_HT-SELEX_1 		0.704 0.807
HOXB13
M05202_2.00 		Homo sapiens
NCTCGTAAAHH
DDTTTACGAGN		 SELEX
Yin et al.(2017)
HOXB13_eDBD_HT-SELEX_2 		0.704 0.807
HOXB13
M09149_2.00 		Homo sapiens
TTTTATDRSN
NSYHATAAAA		 Misc
Kulakovskiy et al.(2013)
HXB13_HUMAN.H11MO.0.A 		0.704 0.807
HOXB13
M05203_2.00 		Homo sapiens
NCTCGTAAAAH
DTTTTACGAGN		 SELEX
Yin et al.(2017)
HOXB13_eDBD_Methyl-HT-SELEX 		0.704 0.807
HOXD13
M00296_2.00 		Homo sapiens
GKATAAAH
DTTTATMC		 PBM
Barrera et al.(2016)
HOXD13_Q325K 		0.633 0.982
HOXD13
M00297_2.00 		Homo sapiens
NWTWRKNNNN
NNNNMYWAWN		 PBM
Barrera et al.(2016)
HOXD13_Q325R 		0.633 0.982
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFALP00000003245 Homeodomain 138 194

Links

Other Homeodomain family TFs
Other Ficedula albicollis TFs

266 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TOS8 Saccharomyces cerevisiae YGL096W D 0.000
CUP9 Saccharomyces cerevisiae YPL177C D 0.000
ZBAI_04266 Zygosaccharomyces bailii ZBAI_04266 I 0.000
PTSG_05211 Salpingoeca rosetta PTSG_05211 I 0.000
O9G_002924 Rozella allomycis O9G_002924 I 0.000
PAS_chr3_0590 Komagataella pastoris PAS_chr3_0590 I 0.000
SEPMUDRAFT_148705 Sphaerulina musiva SEPMUDRAFT_148705 I 0.000
SKUD_191904 Saccharomyces kudriavzevii SKUD_191904 I 0.000
SU7_3505 Saccharomyces arboricola SU7_3505 I 0.000
TBLA_0C03740 Tetrapisispora blattae TBLA_0C03740 I 0.000
TDEL_0F01810 Torulaspora delbrueckii TDEL_0F01810 I 0.000
TPHA_0B02580 Tetrapisispora phaffii TPHA_0B02580 I 0.000
NDAI_0F02170 Naumovozyma dairenensis NDAI_0F02170 I 0.000
ZBAI_07775 Zygosaccharomyces bailii ZBAI_07775 I 0.000
ZYRO0G22044g Zygosaccharomyces rouxii ZYRO0G22044g I 0.000
Scas_Contig597.15 Saccharomyces castellii Scas_Contig597.15 I 0.000
21608_YPL177C Saccharomyces mikatae 21608_YPL177C I 0.000
22207_YPL177C Saccharomyces paradoxus 22207_YPL177C I 0.000
24630_YPL177C Saccharomyces bayanus 24630_YPL177C I 0.000
8079_YGL096W Saccharomyces bayanus 8079_YGL096W I 0.000
8695_YGL096W Saccharomyces paradoxus 8695_YGL096W I 0.000
XP_002492817.1 Pichia pastoris XP_002492817.1 I 0.000
nRc.2.0.1.g06302 Romanomermis culicivorax nRc.2.0.1.g06302 I 0.000
ENSETEG00000011891 Echinops telfairi ENSETEG00000011891 I 0.000
AACERI_AaceriAFL049C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL049C I 0.000
AAEL014550 Aedes aegypti AAEL014550 I 0.000
ADAC004901 Anopheles darlingi ADAC004901 I 0.000
AGOS_AFL049C Ashbya gossypii AGOS_AFL049C I 0.000
AUEXF2481DRAFT_26059 Aureobasidium subglaciale AUEXF2481DRAFT_26059 I 0.000
BAUCODRAFT_212345 Baudoinia compniacensis BAUCODRAFT_212345 I 0.000
CAGL0C01551g Candida glabrata CAGL0C01551g I 0.000
DI09_143p10 Microsporidia sp DI09_143p10 I 0.000
DOTSEDRAFT_23295 Dothistroma septosporum DOTSEDRAFT_23295 I 0.000
Ecym_2247 Eremothecium cymbalariae Ecym_2247 I 0.000
NCAS_0H01130 Naumovozyma castellii NCAS_0H01130 I 0.000
HPODL_01870 Ogataea parapolymorpha HPODL_01870 I 0.000
KAFR_0A04370 Kazachstania africana KAFR_0A04370 I 0.000
KAFR_0G03650 Kazachstania africana KAFR_0G03650 I 0.000
KLLA0_B10450g Kluyveromyces lactis KLLA0_B10450g I 0.000
KNAG_0F02210 Kazachstania naganishii KNAG_0F02210 I 0.000
Kpol_1036p56 Vanderwaltozyma polyspora Kpol_1036p56 I 0.000
KUCA_T00004797001 Kuraishia capsulata KUCA_T00004797001 I 0.000
M437DRAFT_13662 Aureobasidium melanogenum M437DRAFT_13662 I 0.000
M438DRAFT_396225 Aureobasidium pullulans M438DRAFT_396225 I 0.000
Mycgr3G91768 Zymoseptoria tritici Mycgr3G91768 I 0.000
EFA78674.1 Polysphondylium pallidum EFA78674.1 N 0.000