XP_002492817.1 (Pichia pastoris)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 XP_002492817.1 T231088_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TOS8
M02192_2.00 		Saccharomyces cerevisiae
NNNTKACGTMW
WKACGTMANNN		 PBM
Weirauch et al.(2014)
pTH5696 		0.703 0.607
TOS8
M00057_2.00 		Saccharomyces cerevisiae
NNNCRYGNNN
NNNCRYGNNN		 PBM
Badis et al.(2008)
TOS8_2100 		0.703 0.607
TOS8
M07486_2.00 		Saccharomyces cerevisiae
NWTGACAB
VTGTCAWN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0408.1 		0.703 0.607
TOS8
M08574_2.00 		Saccharomyces cerevisiae
NWTGACAB
VTGTCAWN		 Misc
DeBoer et al.(2011)
YGL096W_494 		0.703 0.607
CUP9
M00059_2.00 		Saccharomyces cerevisiae
TGACABHW
WDVTGTCA		 PBM
Badis et al.(2008)
CUP9_4508 		0.701 0.625
CUP9
M01553_2.00 		Saccharomyces cerevisiae
NWGACAYWWH
DWWRTGTCWN		 PBM
Zhu et al.(2009)
Cup9 		0.701 0.625
CUP9
M07488_2.00 		Saccharomyces cerevisiae
TGACAYAWW
WWTRTGTCA		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0288.1 		0.701 0.625
CUP9
M08576_2.00 		Saccharomyces cerevisiae
TGACAYAWW
WWTRTGTCA		 Misc
DeBoer et al.(2011)
YPL177C_480 		0.701 0.625
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002492817.1 Homeodomain 172 230

Links

Other Homeodomain family TFs
Other Pichia pastoris TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PAS_chr3_0590 Komagataella pastoris PAS_chr3_0590 I 0.867
KUCA_T00004797001 Kuraishia capsulata KUCA_T00004797001 I 0.846
HPODL_01870 Ogataea parapolymorpha HPODL_01870 I 0.786
CAGL0C01551g Candida glabrata CAGL0C01551g I 0.730
O9G_002924 Rozella allomycis O9G_002924 I 0.730
AACERI_AaceriAFL049C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL049C I 0.723
AGOS_AFL049C Ashbya gossypii AGOS_AFL049C I 0.723
Ecym_2247 Eremothecium cymbalariae Ecym_2247 I 0.719
8079_YGL096W Saccharomyces bayanus 8079_YGL096W I 0.711
TDEL_0F01810 Torulaspora delbrueckii TDEL_0F01810 I 0.707
ZBAI_04266 Zygosaccharomyces bailii ZBAI_04266 I 0.707
ZBAI_07775 Zygosaccharomyces bailii ZBAI_07775 I 0.707
ZYRO0G22044g Zygosaccharomyces rouxii ZYRO0G22044g I 0.707
KAFR_0A04370 Kazachstania africana KAFR_0A04370 I 0.706
KNAG_0F02210 Kazachstania naganishii KNAG_0F02210 I 0.706
TOS8 Saccharomyces cerevisiae YGL096W D 0.703
8695_YGL096W Saccharomyces paradoxus 8695_YGL096W I 0.703
SU7_3505 Saccharomyces arboricola SU7_3505 I 0.701
CUP9 Saccharomyces cerevisiae YPL177C D 0.701
21608_YPL177C Saccharomyces mikatae 21608_YPL177C I 0.701
22207_YPL177C Saccharomyces paradoxus 22207_YPL177C I 0.701
24630_YPL177C Saccharomyces bayanus 24630_YPL177C I 0.701
DI09_143p10 Microsporidia sp DI09_143p10 I 0.699
SKUD_191904 Saccharomyces kudriavzevii SKUD_191904 I 0.699
TBLA_0C03740 Tetrapisispora blattae TBLA_0C03740 I 0.699
Kpol_1036p56 Vanderwaltozyma polyspora Kpol_1036p56 I 0.698
NDAI_0F02170 Naumovozyma dairenensis NDAI_0F02170 I 0.697
TPHA_0B02580 Tetrapisispora phaffii TPHA_0B02580 I 0.691
KAFR_0G03650 Kazachstania africana KAFR_0G03650 I 0.689
KLLA0_B10450g Kluyveromyces lactis KLLA0_B10450g I 0.686
NCAS_0H01130 Naumovozyma castellii NCAS_0H01130 I 0.685
Scas_Contig597.15 Saccharomyces castellii Scas_Contig597.15 I 0.685
NDAI_0I01320 Naumovozyma dairenensis NDAI_0I01320 I 0.684
PTSG_05211 Salpingoeca rosetta PTSG_05211 I 0.674
BAUCODRAFT_212345 Baudoinia compniacensis BAUCODRAFT_212345 I 0.673
DOTSEDRAFT_23295 Dothistroma septosporum DOTSEDRAFT_23295 I 0.673
SEPMUDRAFT_148705 Sphaerulina musiva SEPMUDRAFT_148705 I 0.673
AAEL014550 Aedes aegypti AAEL014550 I 0.667
ADAC004901 Anopheles darlingi ADAC004901 I 0.667
AUEXF2481DRAFT_26059 Aureobasidium subglaciale AUEXF2481DRAFT_26059 I 0.667
M437DRAFT_13662 Aureobasidium melanogenum M437DRAFT_13662 I 0.667
M438DRAFT_396225 Aureobasidium pullulans M438DRAFT_396225 I 0.667
EFA78674.1 Polysphondylium pallidum EFA78674.1 N 0.655
Mycgr3G91768 Zymoseptoria tritici Mycgr3G91768 I 0.653
fgenesh1_pg.C_chr_3000478 Mycosphaerella graminicola fgenesh1_pg.C_chr_3000478 I 0.653
UREG_03302 Uncinocarpus reesii UREG_03302 I 0.651
CIMG_02405 Coccidioides immitis CIMG_02405 I 0.649
CPC735_040360 Coccidioides posadasii CPC735_040360 I 0.649
RO3G_16092 Rhizopus oryzae RO3G_16092 I 0.648
Bcin16g01510 Botrytis cinerea Bcin16g01510 I 0.648
nRc.2.0.1.g06302 Romanomermis culicivorax nRc.2.0.1.g06302 I 0.647
CAOG_08013 Capsaspora owczarzaki CAOG_08013 I 0.644
BDDG_04350 Blastomyces dermatitidis BDDG_04350 I 0.639
CMQ_2878 Grosmannia clavigera CMQ_2878 I 0.639
HCBG_07821 Histoplasma capsulatum HCBG_07821 I 0.639
PAAG_08242 Paracoccidioides sp lutzii PAAG_08242 I 0.639
PABG_03443 Paracoccidioides brasiliensis PABG_03443 I 0.639
SBOR_9622 Sclerotinia borealis SBOR_9622 I 0.638
MCYG_05212 Microsporum canis MCYG_05212 I 0.637
H101_04140 Trichophyton interdigitale H101_04140 I 0.637
H102_02629 Trichophyton rubrum H102_02629 I 0.637
H105_02647 Trichophyton soudanense H105_02647 I 0.637
HMPREF1541_05868 Cyphellophora europaea HMPREF1541_05868 I 0.637
MCYG_05212 Arthroderma otae MCYG_05212 I 0.637
MGYG_06255 Microsporum gypseum MGYG_06255 I 0.637
TEQG_04681 Trichophyton equinum TEQG_04681 I 0.637
TESG_03892 Trichophyton tonsurans TESG_03892 I 0.637
CCM_07504 Cordyceps militaris CCM_07504 I 0.635
CFIO01_13375 Colletotrichum fioriniae CFIO01_13375 I 0.635
CGGC5_548 Colletotrichum gloeosporioides CGGC5_548 I 0.635
CH063_07877 Colletotrichum higginsianum CH063_07877 I 0.635
Cob_10045 Colletotrichum orbiculare Cob_10045 I 0.635
CSUB01_05210 Colletotrichum sublineola CSUB01_05210 I 0.635
FFUJ_08605 Fusarium fujikuroi FFUJ_08605 I 0.635
FGRRES_05475 Fusarium graminearum FGRRES_05475 I 0.635
FOXG_09424 Fusarium oxysporum FOXG_09424 I 0.635
FPSE_03531 Fusarium pseudograminearum FPSE_03531 I 0.635
FVEG_07056 Fusarium verticillioides FVEG_07056 I 0.635
GLRG_00169 Colletotrichum graminicola GLRG_00169 I 0.635
MAC_05038 Metarhizium acridum MAC_05038 I 0.635
MAJ_03544 Metarhizium majus MAJ_03544 I 0.635
MAM_01561 Metarhizium album MAM_01561 I 0.635
MANI_005534 Metarhizium anisopliae MANI_005534 I 0.635
MBR_07612 Metarhizium brunneum MBR_07612 I 0.635
MGU_03903 Metarhizium guizhouense MGU_03903 I 0.635
NechaG47076 Fusarium solani NechaG47076 I 0.635
PFICI_08004 Pestalotiopsis fici PFICI_08004 I 0.635
PODANS_7_8640 Podospora anserina PODANS_7_8640 I 0.635
SAPIO_CDS5633 Scedosporium apiospermum SAPIO_CDS5633 I 0.635
TRIVIDRAFT_66021 Trichoderma virens TRIVIDRAFT_66021 I 0.635
UCRPA7_6413 Togninia minima UCRPA7_6413 I 0.635
UV8b_1333 Ustilaginoidea virens UV8b_1333 I 0.635
VDAG_05860 Verticillium dahliae VDAG_05860 I 0.635
VHEMI09994 Torrubiella hemipterigena VHEMI09994 I 0.635
X797_003276 Metarhizium robertsii X797_003276 I 0.635
e_gw1.10.718.1 Nectria haematococca e_gw1.10.718.1 I 0.635
estExt_fgenesh1_kg.C_10377 Cryphonectria parasitica estExt_fgenesh1_kg.C_10377 I 0.635
ACRE_074710 Acremonium chrysogenum ACRE_074710 I 0.634
BBA_02288 Beauveria bassiana BBA_02288 I 0.634
CPUR_04957 Claviceps purpurea CPUR_04957 I 0.634
GGTG_09473 Gaeumannomyces graminis GGTG_09473 I 0.634
HMPREF1624_03122 Sporothrix schenckii HMPREF1624_03122 I 0.634
MAPG_03299 Magnaporthe poae MAPG_03299 I 0.634
MBM_04421 Marssonina brunnea MBM_04421 I 0.634
MGG_12865 Magnaporthe oryzae MGG_12865 I 0.634
OCS_00805 Ophiocordyceps sinensis OCS_00805 I 0.634
S40285_00213 Stachybotrys chlorohalonata S40285_00213 I 0.634
S40288_02232 Stachybotrys chartarum S40288_02232 I 0.634
SPBR_01615 Sporothrix brasiliensis SPBR_01615 I 0.634
ENSETEG00000011891 Echinops telfairi ENSETEG00000011891 I 0.630
AOL_s00043g624 Arthrobotrys oligospora AOL_s00043g624 I 0.629
DRE_03716 Drechslerella stenobrocha DRE_03716 I 0.629
GSTUM_00001289001 Tuber melanosporum GSTUM_00001289001 I 0.629
H072_5904 Dactylellina haptotyla H072_5904 I 0.629
YALI0_E29271g Yarrowia lipolytica YALI0_E29271g I 0.629
GLOINDRAFT_34295 Rhizophagus irregularis GLOINDRAFT_34295 I 0.628
gw1.4.538.1 Phycomyces blakesleeanus gw1.4.538.1 I 0.628
ENSPVAG00000016033 Pteropus vampyrus ENSPVAG00000016033 I 0.627
GMDG_03612 Pseudogymnoascus destructans GMDG_03612 I 0.623
V499_08977 Pseudogymnoascus pannorum V499_08977 I 0.623
OIDMADRAFT_174310 Oidiodendron maius OIDMADRAFT_174310 I 0.622
CANTEDRAFT_114099 Candida tenuis CANTEDRAFT_114099 N 0.620
DEHA2D03454g Debaryomyces hansenii DEHA2D03454g N 0.620
W97_04827 Coniosporium apollinis W97_04827 I 0.620
gw1.1.1247.1 Mucor circinelloides gw1.1.1247.1 I 0.619
RO3G_05257 Rhizopus oryzae RO3G_05257 I 0.618
gw1.12.162.1 Phycomyces blakesleeanus gw1.12.162.1 I 0.618
gw1.9.458.1 Mucor circinelloides gw1.9.458.1 I 0.617
GNLVRS01_PISO0I03704g Millerozyma farinosa GNLVRS01_PISO0I03704g N 0.616
GNLVRS01_PISO0J05487g Millerozyma farinosa GNLVRS01_PISO0J05487g N 0.616
RO3G_06212 Rhizopus oryzae RO3G_06212 I 0.615
TRIATDRAFT_255946 Trichoderma atroviride TRIATDRAFT_255946 I 0.615
fgeneshMC_pg.2_#_512 Mucor circinelloides fgeneshMC_pg.2_#_512 I 0.615
gw1.4.539.1 Phycomyces blakesleeanus gw1.4.539.1 I 0.615
e_gw1.4.537.1 Phycomyces blakesleeanus e_gw1.4.537.1 I 0.614
U727_00434000211 Penicillium solitum U727_00434000211 I 0.613
NEUTE1DRAFT_146316 Neurospora tetrasperma NEUTE1DRAFT_146316 I 0.612
SMAC_08102 Sordaria macrospora SMAC_08102 I 0.612
RO3G_09577 Rhizopus oryzae RO3G_09577 I 0.610
CPAG_03922 Candida parapsilosis CPAG_03922 N 0.608
CaO19.13867 Candida albicans CaO19.13867 N 0.608
CaO19.6514 Candida albicans CaO19.6514 N 0.608
CD36_71860 Candida dubliniensis CD36_71860 N 0.608
CORT_0H01330 Candida orthopsilosis CORT_0H01330 N 0.608
CTRG_05054 Candida tropicalis CTRG_05054 N 0.608
EV44_g1627 Erysiphe necator EV44_g1627 I 0.608
G210_2394 Candida maltosa G210_2394 N 0.608
LELG_05517 Lodderomyces elongisporus LELG_05517 N 0.608
SPAPADRAFT_63770 Spathaspora passalidarum SPAPADRAFT_63770 N 0.608
RO3G_07216 Rhizopus oryzae RO3G_07216 I 0.607
ACLA_049330 Aspergillus clavatus CADACLAG00004622 I 0.605
CADAFLAG00001985 Aspergillus flavus CADAFLAG00001985 I 0.605
AFUA_4G10110 Aspergillus fumigatus CADAFUAG00007930 I 0.605
CADANGAG00004406 Aspergillus niger CADANGAG00004406 I 0.605
ATEG_00728 Aspergillus terreus CADATEAG00006320 I 0.605
NFIA_105940 Neosartorya fischeri CADNFIAG00009658 I 0.605
PCH_Pc22g12270 Penicillium rubens PCH_Pc22g12270 I 0.605
PDE_03970 Penicillium oxalicum PDE_03970 I 0.605
PEX1_044990 Penicillium expansum PEX1_044990 I 0.605
PITC_045080 Penicillium italicum PITC_045080 I 0.605
PMAA_096860 Talaromyces marneffei PMAA_096860 I 0.605
PV05_11128 Exophiala xenobiotica PV05_11128 I 0.605
U727_00434374131 Penicillium solitum U727_00434374131 I 0.605
fgenesh1_pm.00178_#_1 Aspergillus carbonarius fgenesh1_pm.00178_#_1 I 0.605
Pc22g12270 Penicillium chrysogenum Pc22g12270 I 0.605
PMAA_096860 Penicillium marneffei PMAA_096860 I 0.605
PICST_32431 Scheffersomyces stipitis PICST_32431 N 0.604
fgenesh1_pg.C_chr_5.1000595 Pichia stipitis fgenesh1_pg.C_chr_5.1000595 N 0.604
Kwal_11092 Kluyveromyces waltii Kwal_11092 I 0.604
TSTA_044270 Talaromyces stipitatus TSTA_044270 I 0.603
BN7_1044 Wickerhamomyces ciferrii BN7_1044 N 0.599