|
HOXA7
(Homo sapiens)
Homeodomain
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
Animal TF db |
PF00046 (Homeobox) |
IPR001356 |
ENSG00000122592 |
T209822_2.00 |
Ensembl (2018-Dec-8) |
Link out |
NCBI Gene Info:In vertebrates, the genes encoding the class of transcription factors called homeobox genes are found in clusters named A, B, C, and D on four separate chromosomes. Expression of these proteins is spatially and temporally regulated during embryonic development. This gene is part of the A cluster on chromosome 7 and encodes a DNA-binding transcription factor which may regulate gene expression, morphogenesis, and differentiation. For example, the encoded protein represses the transcription of differentiation-specific genes during keratinocyte proliferation, but this repression is then overcome by differentiation signals. This gene is highly similar to the antennapedia (Antp) gene of Drosophila. [provided by RefSeq, Jul 2008] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
HOXA7 M05069_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05069_2.00_fwd.png) NTAATKRV |
![](data/2.00/DataFiles/Logos/Files/M05069_2.00_rev.png) BYMATTAN |
SELEX
Yin et al.(2017)
HOXA7_eDBD_HT-SELEX |
(Direct) |
(Direct) |
HOXA7 M05070_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05070_2.00_fwd.png) NTAATKRN |
![](data/2.00/DataFiles/Logos/Files/M05070_2.00_rev.png) NYMATTAN |
SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_1 |
(Direct) |
(Direct) |
HOXA7 M05071_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05071_2.00_fwd.png) NTAAYGAY |
![](data/2.00/DataFiles/Logos/Files/M05071_2.00_rev.png) RTCRTTAN |
SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_2 |
(Direct) |
(Direct) |
HOXA7 M10679_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA7_01 |
(Direct) |
(Direct) |
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
Hoxa7
M00476_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00476_2.00_fwd.png) NNWAYNDNN |
![](data/2.00/DataFiles/Logos/Files/M00476_2.00_rev.png) NNHNRTWNN |
PBM
Berger et al.(2008)
Hoxa7_2668
|
0.867
|
1.000
|
Hoxa7
M00477_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00477_2.00_fwd.png) NYHHYNNNN |
![](data/2.00/DataFiles/Logos/Files/M00477_2.00_rev.png) NNNNRDDRN |
PBM
Berger et al.(2008)
Hoxa7_3750
|
0.867
|
1.000
|
Antp
M06549_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06549_2.00_fwd.png) TTAATKA |
![](data/2.00/DataFiles/Logos/Files/M06549_2.00_rev.png) TMATTAA |
B1H
Mathelier et al.(2014)
MA0166.1
|
0.867
|
1.000
|
Antp
M06374_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06374_2.00_fwd.png) YTTAATKA |
![](data/2.00/DataFiles/Logos/Files/M06374_2.00_rev.png) TMATTAAR |
B1H
Zhu et al.(2011)
Antp_Cell_FBgn0000095
|
0.867
|
1.000
|
Antp
M06375_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06375_2.00_fwd.png) WTAATW |
![](data/2.00/DataFiles/Logos/Files/M06375_2.00_rev.png) AATTAW |
B1H
Zhu et al.(2011)
Antp_FlyReg_FBgn0000095
|
0.867
|
1.000
|
Antp
M06376_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06376_2.00_fwd.png) NHTAATKR |
![](data/2.00/DataFiles/Logos/Files/M06376_2.00_rev.png) YMATTADN |
B1H
Zhu et al.(2011)
Antp_SOLEXA_FBgn0000095
|
0.867
|
1.000
|
Antp
M09682_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M09682_2.00_fwd.png) TYTTWATKA |
![](data/2.00/DataFiles/Logos/Files/M09682_2.00_rev.png) TMATWAARA |
Misc
Kulakovskiy et al.(2009)
Antp
|
0.867
|
1.000
|
Antp
M10789_2.00 |
Drosophila melanogaster |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
I$ANTP_Q6_01
|
0.867
|
1.000
|
HOXB7
M00334_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M00334_2.00_fwd.png) NBRDNNN |
![](data/2.00/DataFiles/Logos/Files/M00334_2.00_rev.png) NNNHYVN |
PBM
Barrera et al.(2016)
HOXB7_REF
|
0.850
|
0.965
|
Hoxb7
M00481_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00481_2.00_fwd.png) NNWAYNDN |
![](data/2.00/DataFiles/Logos/Files/M00481_2.00_rev.png) NHNRTWNN |
PBM
Berger et al.(2008)
Hoxb7_3953
|
0.850
|
0.965
|
HOXB7
M05404_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05404_2.00_fwd.png) BTAATKRV |
![](data/2.00/DataFiles/Logos/Files/M05404_2.00_rev.png) BYMATTAV |
SELEX
Yin et al.(2017)
HOXB7_eDBD_HT-SELEX
|
0.850
|
0.965
|
HOXB7
M05407_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05407_2.00_fwd.png) BBTAATTRCN |
![](data/2.00/DataFiles/Logos/Files/M05407_2.00_rev.png) NGYAATTAVV |
SELEX
Yin et al.(2017)
HOXB7_FL_HT-SELEX
|
0.850
|
0.965
|
HOXB7
M09166_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M09166_2.00_fwd.png) MATHAATCAW |
![](data/2.00/DataFiles/Logos/Files/M09166_2.00_rev.png) WTGATTDATK |
Misc
Kulakovskiy et al.(2013)
HXB7_HUMAN.H11MO.0.C
|
0.850
|
0.965
|
Hoxb7
M09206_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M09206_2.00_fwd.png) MATHAATCAW |
![](data/2.00/DataFiles/Logos/Files/M09206_2.00_rev.png) WTGATTDATK |
Misc
Kulakovskiy et al.(2013)
HXB7_MOUSE.H11MO.0.C
|
0.850
|
0.965
|
HOXB7
M05405_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05405_2.00_fwd.png) BTAATKRV |
![](data/2.00/DataFiles/Logos/Files/M05405_2.00_rev.png) BYMATTAV |
SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_1
|
0.850
|
0.965
|
HOXB7
M05406_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05406_2.00_fwd.png) NTAAYGAY |
![](data/2.00/DataFiles/Logos/Files/M05406_2.00_rev.png) RTCRTTAN |
SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_2
|
0.850
|
0.965
|
HOXB7
M05408_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05408_2.00_fwd.png) NNTAATKRCN |
![](data/2.00/DataFiles/Logos/Files/M05408_2.00_rev.png) NGYMATTANN |
SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_1
|
0.850
|
0.965
|
HOXB7
M05409_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05409_2.00_fwd.png) NTAAYGAY |
![](data/2.00/DataFiles/Logos/Files/M05409_2.00_rev.png) RTCRTTAN |
SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_2
|
0.850
|
0.965
|
HOXB7
M00333_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M00333_2.00_fwd.png) NHATWTATTN |
![](data/2.00/DataFiles/Logos/Files/M00333_2.00_rev.png) NAATAWATDN |
PBM
Barrera et al.(2016)
HOXB7_R189C
|
0.850
|
0.947
|
ftz
M03795_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M03795_2.00_fwd.png) WTAATTRC |
![](data/2.00/DataFiles/Logos/Files/M03795_2.00_rev.png) GYAATTAW |
SELEX
Nitta et al.(2015)
ftz_1
|
0.840
|
0.877
|
ftz
M06488_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06488_2.00_fwd.png) TTAATKA |
![](data/2.00/DataFiles/Logos/Files/M06488_2.00_rev.png) TMATTAA |
B1H
Mathelier et al.(2014)
MA0225.1
|
0.840
|
0.877
|
ftz
M06247_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06247_2.00_fwd.png) VTTAATKA |
![](data/2.00/DataFiles/Logos/Files/M06247_2.00_rev.png) TMATTAAB |
B1H
Zhu et al.(2011)
Ftz_Cell_FBgn0001077
|
0.840
|
0.877
|
ftz
M06248_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06248_2.00_fwd.png) TAATKRNH |
![](data/2.00/DataFiles/Logos/Files/M06248_2.00_rev.png) DNYMATTA |
B1H
Zhu et al.(2011)
ftz_FlyReg_FBgn0001077
|
0.840
|
0.877
|
ftz
M06249_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06249_2.00_fwd.png) BTAATKA |
![](data/2.00/DataFiles/Logos/Files/M06249_2.00_rev.png) TMATTAV |
B1H
Zhu et al.(2011)
Ftz_SOLEXA_FBgn0001077
|
0.840
|
0.877
|
ftz
M09679_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M09679_2.00_fwd.png) YTAATKRNN |
![](data/2.00/DataFiles/Logos/Files/M09679_2.00_rev.png) NNYMATTAR |
Misc
Kulakovskiy et al.(2009)
ftz
|
0.840
|
0.877
|
ftz
M10787_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M10787_2.00_fwd.png) CTTAATTRBHBB |
![](data/2.00/DataFiles/Logos/Files/M10787_2.00_rev.png) VVDVYAATTAAG |
Transfac
Matys et al.(2006)
I$FTZ_01
|
0.840
|
0.877
|
Hoxa6
M00494_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00494_2.00_fwd.png) NWWATKRNN |
![](data/2.00/DataFiles/Logos/Files/M00494_2.00_rev.png) NNYMATWWN |
PBM
Berger et al.(2008)
Hoxa6_1040
|
0.835
|
0.965
|
HOXA6
M04974_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04974_2.00_fwd.png) NNTAATKRVN |
![](data/2.00/DataFiles/Logos/Files/M04974_2.00_rev.png) NBYMATTANN |
SELEX
Yin et al.(2017)
HOXA6_eDBD_HT-SELEX
|
0.835
|
0.965
|
HOXA6
M04975_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04975_2.00_fwd.png) NNTAATKRBN |
![](data/2.00/DataFiles/Logos/Files/M04975_2.00_rev.png) NVYMATTANN |
SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_1
|
0.835
|
0.965
|
HOXA6
M04976_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04976_2.00_fwd.png) NTAAYGRY |
![](data/2.00/DataFiles/Logos/Files/M04976_2.00_rev.png) RYCRTTAN |
SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_2
|
0.835
|
0.965
|
Hoxb6
M00381_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00381_2.00_fwd.png) NNDHNNN |
![](data/2.00/DataFiles/Logos/Files/M00381_2.00_rev.png) NNNDHNN |
PBM
Berger et al.(2008)
Hoxb6_3428
|
0.831
|
0.965
|
HOXB6
M04999_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04999_2.00_fwd.png) NTAATKRY |
![](data/2.00/DataFiles/Logos/Files/M04999_2.00_rev.png) RYMATTAN |
SELEX
Yin et al.(2017)
HOXB6_eDBD_HT-SELEX
|
0.831
|
0.965
|
HOXB6
M05000_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05000_2.00_fwd.png) HTAAYGAY |
![](data/2.00/DataFiles/Logos/Files/M05000_2.00_rev.png) RTCRTTAD |
SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_1
|
0.831
|
0.965
|
HOXB6
M05001_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05001_2.00_fwd.png) NTWATKRB |
![](data/2.00/DataFiles/Logos/Files/M05001_2.00_rev.png) VYMATWAN |
SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_2
|
0.831
|
0.965
|
Hoxc6
M00392_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00392_2.00_fwd.png) TTAATTAB |
![](data/2.00/DataFiles/Logos/Files/M00392_2.00_rev.png) VTAATTAA |
PBM
Berger et al.(2008)
Hoxc6_3954
|
0.822
|
0.930
|
Hoxb8
M00517_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00517_2.00_fwd.png) NWWAYNDNN |
![](data/2.00/DataFiles/Logos/Files/M00517_2.00_rev.png) NNHNRTWWN |
PBM
Berger et al.(2008)
Hoxb8_3780
|
0.821
|
0.842
|
HOXB8
M05048_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05048_2.00_fwd.png) NTAATKRM |
![](data/2.00/DataFiles/Logos/Files/M05048_2.00_rev.png) KYMATTAN |
SELEX
Yin et al.(2017)
HOXB8_eDBD_HT-SELEX
|
0.821
|
0.842
|
HOXB8
M09141_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M09141_2.00_fwd.png) BMATHAATCAA |
![](data/2.00/DataFiles/Logos/Files/M09141_2.00_rev.png) TTGATTDATKV |
Misc
Kulakovskiy et al.(2013)
HXB8_HUMAN.H11MO.0.C
|
0.821
|
0.842
|
Hoxb8
M09214_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M09214_2.00_fwd.png) BMATHAATCAA |
![](data/2.00/DataFiles/Logos/Files/M09214_2.00_rev.png) TTGATTDATKV |
Misc
Kulakovskiy et al.(2013)
HXB8_MOUSE.H11MO.0.C
|
0.821
|
0.842
|
HOXB8
M05049_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05049_2.00_fwd.png) NTAATKRN |
![](data/2.00/DataFiles/Logos/Files/M05049_2.00_rev.png) NYMATTAN |
SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_1
|
0.821
|
0.842
|
HOXB8
M05050_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05050_2.00_fwd.png) NTAAYGAY |
![](data/2.00/DataFiles/Logos/Files/M05050_2.00_rev.png) RTCRTTAN |
SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_2
|
0.821
|
0.842
|
HOXD8
M03221_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M03221_2.00_fwd.png) VHWAATKWDN |
![](data/2.00/DataFiles/Logos/Files/M03221_2.00_rev.png) NHWMATTWDB |
SELEX
Jolma et al.(2013)
HOXD8_1
|
0.821
|
0.825
|
HOXD8
M05310_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05310_2.00_fwd.png) BTAATKRY |
![](data/2.00/DataFiles/Logos/Files/M05310_2.00_rev.png) RYMATTAV |
SELEX
Yin et al.(2017)
HOXD8_eDBD_HT-SELEX
|
0.821
|
0.825
|
HOXD8
M05311_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05311_2.00_fwd.png) NTAATKRN |
![](data/2.00/DataFiles/Logos/Files/M05311_2.00_rev.png) NYMATTAN |
SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_1
|
0.821
|
0.825
|
HOXD8
M05312_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05312_2.00_fwd.png) NTWAYGRY |
![](data/2.00/DataFiles/Logos/Files/M05312_2.00_rev.png) RYCRTWAN |
SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_2
|
0.821
|
0.825
|
CBG00029
M01240_2.00 |
Caenorhabditis briggsae |
![](data/2.00/DataFiles/Logos/Files/M01240_2.00_fwd.png) ATTAATTA |
![](data/2.00/DataFiles/Logos/Files/M01240_2.00_rev.png) TAATTAAT |
PBM
Lambert et al.(2019)
pTH11471
|
0.818
|
0.754
|
abd-A
M03770_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M03770_2.00_fwd.png) NNTAATKRCN |
![](data/2.00/DataFiles/Logos/Files/M03770_2.00_rev.png) NGYMATTANN |
SELEX
Nitta et al.(2015)
abd-A_1
|
0.814
|
0.930
|
abd-A
M03771_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M03771_2.00_fwd.png) NNTAATKRCN |
![](data/2.00/DataFiles/Logos/Files/M03771_2.00_rev.png) NGYMATTANN |
SELEX
Nitta et al.(2015)
abd-A_2
|
0.814
|
0.930
|
abd-A
M06475_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06475_2.00_fwd.png) TTAATKA |
![](data/2.00/DataFiles/Logos/Files/M06475_2.00_rev.png) TMATTAA |
B1H
Mathelier et al.(2014)
MA0206.1
|
0.814
|
0.930
|
abd-A
M06210_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06210_2.00_fwd.png) WTWATKDM |
![](data/2.00/DataFiles/Logos/Files/M06210_2.00_rev.png) KHMATWAW |
B1H
Zhu et al.(2011)
Abd-A_FlyReg_FBgn0000014
|
0.814
|
0.930
|
abd-A
M09671_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M09671_2.00_fwd.png) HTAATKRH |
![](data/2.00/DataFiles/Logos/Files/M09671_2.00_rev.png) DYMATTAD |
Misc
Kulakovskiy et al.(2009)
abd-A
|
0.814
|
0.930
|
abd-A
M10778_2.00 |
Drosophila melanogaster |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
I$ABDA_Q6
|
0.814
|
0.930
|
Hoxd8
M00436_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00436_2.00_fwd.png) NNWWYNNN |
![](data/2.00/DataFiles/Logos/Files/M00436_2.00_rev.png) NNNRWWNN |
PBM
Berger et al.(2008)
Hoxd8_2644
|
0.809
|
0.807
|
Ubx
M00558_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M00558_2.00_fwd.png) NWWAYDDNN |
![](data/2.00/DataFiles/Logos/Files/M00558_2.00_rev.png) NNHHRTWWN |
PBM
Busser et al.(2012a)
Ubx
|
0.805
|
0.912
|
Ubx
M03804_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M03804_2.00_fwd.png) NTAATKRH |
![](data/2.00/DataFiles/Logos/Files/M03804_2.00_rev.png) DYMATTAN |
SELEX
Nitta et al.(2015)
Ubx_1
|
0.805
|
0.912
|
Ubx
M06499_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06499_2.00_fwd.png) NTTAATKR |
![](data/2.00/DataFiles/Logos/Files/M06499_2.00_rev.png) YMATTAAN |
B1H
Mathelier et al.(2014)
MA0094.2
|
0.805
|
0.912
|
Ubx
M06273_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06273_2.00_fwd.png) NTTAATKR |
![](data/2.00/DataFiles/Logos/Files/M06273_2.00_rev.png) YMATTAAN |
B1H
Zhu et al.(2011)
Ubx_Cell_FBgn0003944
|
0.805
|
0.912
|
Ubx
M06274_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06274_2.00_fwd.png) TAATKD |
![](data/2.00/DataFiles/Logos/Files/M06274_2.00_rev.png) HMATTA |
B1H
Zhu et al.(2011)
Ubx_FlyReg_FBgn0003944
|
0.805
|
0.912
|
Ubx
M06275_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06275_2.00_fwd.png) NTTWATKR |
![](data/2.00/DataFiles/Logos/Files/M06275_2.00_rev.png) YMATWAAN |
B1H
Zhu et al.(2011)
Ubx_SOLEXA_FBgn0003944
|
0.805
|
0.912
|
Ubx
M09680_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M09680_2.00_fwd.png) TTAATKR |
![](data/2.00/DataFiles/Logos/Files/M09680_2.00_rev.png) YMATTAA |
Misc
Kulakovskiy et al.(2009)
Ubx
|
0.805
|
0.912
|
Ubx
M10788_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M10788_2.00_fwd.png) NNVNNNNTAATKRNBHNND |
![](data/2.00/DataFiles/Logos/Files/M10788_2.00_rev.png) HNNDVNYMATTANNNNBNN |
Transfac
Matys et al.(2006)
I$UBX_01
|
0.805
|
0.912
|
HOXB7
M00331_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M00331_2.00_fwd.png) NNNNNNY |
![](data/2.00/DataFiles/Logos/Files/M00331_2.00_rev.png) RNNNNNN |
PBM
Barrera et al.(2016)
HOXB7_K191R
|
0.794
|
0.947
|
Hoxc8
M00391_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00391_2.00_fwd.png) NNDNYNNNN |
![](data/2.00/DataFiles/Logos/Files/M00391_2.00_rev.png) NNNNRNHNN |
PBM
Berger et al.(2008)
Hoxc8_3429
|
0.789
|
0.825
|
HOXC8
M04912_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04912_2.00_fwd.png) NYAATTRN |
![](data/2.00/DataFiles/Logos/Files/M04912_2.00_rev.png) NYAATTRN |
SELEX
Yin et al.(2017)
HOXC8_FL_HT-SELEX
|
0.789
|
0.825
|
HOXC8
M10636_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXC8_Q3
|
0.789
|
0.825
|
HOXC8
M04913_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04913_2.00_fwd.png) NYMATKRN |
![](data/2.00/DataFiles/Logos/Files/M04913_2.00_rev.png) NYMATKRN |
SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_1
|
0.789
|
0.825
|
HOXC8
M04914_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04914_2.00_fwd.png) NTWAYGRY |
![](data/2.00/DataFiles/Logos/Files/M04914_2.00_rev.png) RYCRTWAN |
SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_2
|
0.789
|
0.825
|
HOXB7
M00332_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M00332_2.00_fwd.png) NDWATATAYN |
![](data/2.00/DataFiles/Logos/Files/M00332_2.00_rev.png) NRTATATWHN |
PBM
Barrera et al.(2016)
HOXB7_M190L
|
0.774
|
0.947
|
egl-5
M09581_2.00 |
Caenorhabditis elegans |
![](data/2.00/DataFiles/Logos/Files/M09581_2.00_fwd.png) DWTTWATGGS |
![](data/2.00/DataFiles/Logos/Files/M09581_2.00_rev.png) SCCATWAAWH |
Misc
Heinz et al.(2010)
cElegans-L3-EGL5_modEncode
|
0.750
|
0.579
|
CBG00023
M02062_2.00 |
Caenorhabditis briggsae |
![](data/2.00/DataFiles/Logos/Files/M02062_2.00_fwd.png) NWWATKDNNN |
![](data/2.00/DataFiles/Logos/Files/M02062_2.00_rev.png) NNNHMATWWN |
PBM
Weirauch et al.(2014)
pTH5778
|
0.750
|
0.561
|
Q8I9J5_9BILA
M02214_2.00 |
Spadella cephaloptera |
![](data/2.00/DataFiles/Logos/Files/M02214_2.00_fwd.png) NVTAWTWABN |
![](data/2.00/DataFiles/Logos/Files/M02214_2.00_rev.png) NVTWAWTABN |
PBM
Weirauch et al.(2014)
pTH6164
|
0.726
|
0.684
|
Scr
M03799_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M03799_2.00_fwd.png) BTAATKRB |
![](data/2.00/DataFiles/Logos/Files/M03799_2.00_rev.png) VYMATTAV |
SELEX
Nitta et al.(2015)
Scr_1
|
0.707
|
0.947
|
Scr
M06496_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06496_2.00_fwd.png) YTAATKA |
![](data/2.00/DataFiles/Logos/Files/M06496_2.00_rev.png) TMATTAR |
B1H
Mathelier et al.(2014)
MA0203.1
|
0.707
|
0.947
|
Scr
M06266_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06266_2.00_fwd.png) HVYTAATKA |
![](data/2.00/DataFiles/Logos/Files/M06266_2.00_rev.png) TMATTARBD |
B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339
|
0.707
|
0.947
|
Scr
M06267_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06267_2.00_fwd.png) YTAATKR |
![](data/2.00/DataFiles/Logos/Files/M06267_2.00_rev.png) YMATTAR |
B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339
|
0.707
|
0.947
|
Hoxa5
M00478_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00478_2.00_fwd.png) NTAATNDNN |
![](data/2.00/DataFiles/Logos/Files/M00478_2.00_rev.png) NNHNATTAN |
PBM
Berger et al.(2008)
Hoxa5_3415
|
0.707
|
0.930
|
Hoxb5
M00480_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00480_2.00_fwd.png) NWDWTNNNN |
![](data/2.00/DataFiles/Logos/Files/M00480_2.00_rev.png) NNNNAWHWN |
PBM
Berger et al.(2008)
Hoxb5_3122
|
0.707
|
0.930
|
HOXB5
M03125_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M03125_2.00_fwd.png) NNKAATKRNN |
![](data/2.00/DataFiles/Logos/Files/M03125_2.00_rev.png) NNYMATTMNN |
SELEX
Jolma et al.(2013)
HOXB5_1
|
0.707
|
0.930
|
HOXA5
M04968_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04968_2.00_fwd.png) STAATKRS |
![](data/2.00/DataFiles/Logos/Files/M04968_2.00_rev.png) SYMATTAS |
SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX
|
0.707
|
0.930
|
HOXA5
M04971_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04971_2.00_fwd.png) NTMATKRB |
![](data/2.00/DataFiles/Logos/Files/M04971_2.00_rev.png) VYMATKAN |
SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX
|
0.707
|
0.930
|
HOXB5
M05051_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05051_2.00_fwd.png) NTAATKRV |
![](data/2.00/DataFiles/Logos/Files/M05051_2.00_rev.png) BYMATTAN |
SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX
|
0.707
|
0.930
|
HOXB5
M05054_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05054_2.00_fwd.png) STMATKAB |
![](data/2.00/DataFiles/Logos/Files/M05054_2.00_rev.png) VTMATKAS |
SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX
|
0.707
|
0.930
|
HOXA5
M10652_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M10652_2.00_fwd.png) NGRDBKBDHNBAVTAATKRRGRDVDDDGSR |
![](data/2.00/DataFiles/Logos/Files/M10652_2.00_rev.png) YSCHHHBHYCYYMATTABTVNDHVMVHYCN |
Transfac
Matys et al.(2006)
V$HOX13_01
|
0.707
|
0.930
|
HOXA5
M08457_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M08457_2.00_fwd.png) CDBWAATK |
![](data/2.00/DataFiles/Logos/Files/M08457_2.00_rev.png) MATTWVHG |
COMPILED
Mathelier et al.(2014)
MA0158.1
|
0.707
|
0.930
|
HOXA5
M04969_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04969_2.00_fwd.png) BTAATKRV |
![](data/2.00/DataFiles/Logos/Files/M04969_2.00_rev.png) BYMATTAV |
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1
|
0.707
|
0.930
|
HOXA5
M04970_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04970_2.00_fwd.png) NTAAYGAY |
![](data/2.00/DataFiles/Logos/Files/M04970_2.00_rev.png) RTCRTTAN |
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2
|
0.707
|
0.930
|
HOXA5
M04972_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04972_2.00_fwd.png) NTMATKRN |
![](data/2.00/DataFiles/Logos/Files/M04972_2.00_rev.png) NYMATKAN |
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1
|
0.707
|
0.930
|
HOXA5
M04973_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04973_2.00_fwd.png) NTAAYGAY |
![](data/2.00/DataFiles/Logos/Files/M04973_2.00_rev.png) RTCRTTAN |
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2
|
0.707
|
0.930
|
HOXB5
M05052_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05052_2.00_fwd.png) NTMATKRN |
![](data/2.00/DataFiles/Logos/Files/M05052_2.00_rev.png) NYMATKAN |
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1
|
0.707
|
0.930
|
HOXB5
M05053_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05053_2.00_fwd.png) NTAAYGAY |
![](data/2.00/DataFiles/Logos/Files/M05053_2.00_rev.png) RTCRTTAN |
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2
|
0.707
|
0.930
|
HOXB5
M05055_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05055_2.00_fwd.png) NTMATKAB |
![](data/2.00/DataFiles/Logos/Files/M05055_2.00_rev.png) VTMATKAN |
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1
|
0.707
|
0.930
|
HOXB5
M05056_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05056_2.00_fwd.png) HTAAYGAY |
![](data/2.00/DataFiles/Logos/Files/M05056_2.00_rev.png) RTCRTTAD |
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2
|
0.707
|
0.930
|
Hoxc5
M00422_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00422_2.00_fwd.png) NWRATND |
![](data/2.00/DataFiles/Logos/Files/M00422_2.00_rev.png) HNATYWN |
PBM
Berger et al.(2008)
Hoxc5_2630
|
0.695
|
0.895
|
CBG23031
M01245_2.00 |
Caenorhabditis briggsae |
![](data/2.00/DataFiles/Logos/Files/M01245_2.00_fwd.png) NTTWATKRNN |
![](data/2.00/DataFiles/Logos/Files/M01245_2.00_rev.png) NNYMATWAAN |
PBM
Lambert et al.(2019)
pTH11458
|
0.681
|
0.526
|
Hoxb4
M00479_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00479_2.00_fwd.png) NTAATNDNN |
![](data/2.00/DataFiles/Logos/Files/M00479_2.00_rev.png) NNHNATTAN |
PBM
Berger et al.(2008)
Hoxb4_2627
|
0.658
|
0.860
|
HOXB4
M05343_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05343_2.00_fwd.png) YTAATKAY |
![](data/2.00/DataFiles/Logos/Files/M05343_2.00_rev.png) RTMATTAR |
SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX
|
0.658
|
0.860
|
HOXB4
M09162_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M09162_2.00_fwd.png) YTAATKRS |
![](data/2.00/DataFiles/Logos/Files/M09162_2.00_rev.png) SYMATTAR |
Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B
|
0.658
|
0.860
|
Hoxb4
M09204_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M09204_2.00_fwd.png) YTAATKRS |
![](data/2.00/DataFiles/Logos/Files/M09204_2.00_rev.png) SYMATTAR |
Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A
|
0.658
|
0.860
|
Hoxb4
M09576_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M09576_2.00_fwd.png) TGATDRATKRSN |
![](data/2.00/DataFiles/Logos/Files/M09576_2.00_rev.png) NSYMATYHATCA |
Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014
|
0.658
|
0.860
|
HOXB4
M05344_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05344_2.00_fwd.png) HTAAYGAY |
![](data/2.00/DataFiles/Logos/Files/M05344_2.00_rev.png) RTCRTTAD |
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1
|
0.658
|
0.860
|
HOXB4
M05345_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05345_2.00_fwd.png) HTAAYKAB |
![](data/2.00/DataFiles/Logos/Files/M05345_2.00_rev.png) VTMRTTAD |
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2
|
0.658
|
0.860
|
HOXD4
M05273_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05273_2.00_fwd.png) NTMATKRV |
![](data/2.00/DataFiles/Logos/Files/M05273_2.00_rev.png) BYMATKAN |
SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX
|
0.650
|
0.877
|
HOXD4
M05276_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05276_2.00_fwd.png) NTAATKRB |
![](data/2.00/DataFiles/Logos/Files/M05276_2.00_rev.png) VYMATTAN |
SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX
|
0.650
|
0.877
|
HOXD4
M05274_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05274_2.00_fwd.png) NTMATKRN |
![](data/2.00/DataFiles/Logos/Files/M05274_2.00_rev.png) NYMATKAN |
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1
|
0.650
|
0.877
|
HOXD4
M05275_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05275_2.00_fwd.png) NTAAYGAY |
![](data/2.00/DataFiles/Logos/Files/M05275_2.00_rev.png) RTCRTTAN |
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2
|
0.650
|
0.877
|
HOXD4
M05277_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05277_2.00_fwd.png) NTAATKRN |
![](data/2.00/DataFiles/Logos/Files/M05277_2.00_rev.png) NYMATTAN |
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1
|
0.650
|
0.877
|
HOXD4
M05278_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05278_2.00_fwd.png) NTAAYGAY |
![](data/2.00/DataFiles/Logos/Files/M05278_2.00_rev.png) RTCRTTAN |
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2
|
0.650
|
0.877
|
Hoxa4
M00383_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00383_2.00_fwd.png) NTAATBDNN |
![](data/2.00/DataFiles/Logos/Files/M00383_2.00_rev.png) NNHVATTAN |
PBM
Berger et al.(2008)
Hoxa4_3426
|
0.650
|
0.860
|
HOXA4
M05381_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05381_2.00_fwd.png) NTAATKRY |
![](data/2.00/DataFiles/Logos/Files/M05381_2.00_rev.png) RYMATTAN |
SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX
|
0.650
|
0.860
|
HOXA4
M10755_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA4_Q2
|
0.650
|
0.860
|
HOXA4
M05382_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05382_2.00_fwd.png) NTAAYGAY |
![](data/2.00/DataFiles/Logos/Files/M05382_2.00_rev.png) RTCRTTAN |
SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX
|
0.650
|
0.860
|
HOXC4
M00330_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M00330_2.00_fwd.png) YTAATTRB |
![](data/2.00/DataFiles/Logos/Files/M00330_2.00_rev.png) VYAATTAR |
PBM
Barrera et al.(2016)
HOXC4_REF
|
0.646
|
0.860
|
Hoxc4
M00530_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00530_2.00_fwd.png) NWAATNDNN |
![](data/2.00/DataFiles/Logos/Files/M00530_2.00_rev.png) NNHNATTWN |
PBM
Berger et al.(2008)
Hoxc4_3491
|
0.646
|
0.860
|
HOXC4
M05385_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05385_2.00_fwd.png) NTAATKRN |
![](data/2.00/DataFiles/Logos/Files/M05385_2.00_rev.png) NYMATTAN |
SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX
|
0.646
|
0.860
|
HOXC4
M05386_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05386_2.00_fwd.png) NTAATKRN |
![](data/2.00/DataFiles/Logos/Files/M05386_2.00_rev.png) NYMATTAN |
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1
|
0.646
|
0.860
|
HOXC4
M05387_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05387_2.00_fwd.png) NTAAYGAY |
![](data/2.00/DataFiles/Logos/Files/M05387_2.00_rev.png) RTCRTTAN |
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2
|
0.646
|
0.860
|
HOXC4
M00328_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M00328_2.00_fwd.png) YTAATTAB |
![](data/2.00/DataFiles/Logos/Files/M00328_2.00_rev.png) VTAATTAR |
PBM
Barrera et al.(2016)
HOXC4_N178S
|
0.646
|
0.842
|
Dfd
M03784_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M03784_2.00_fwd.png) VNTAAYKRBN |
![](data/2.00/DataFiles/Logos/Files/M03784_2.00_rev.png) NVYMRTTANB |
SELEX
Nitta et al.(2015)
Dfd_1
|
0.644
|
0.842
|
Dfd
M03785_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M03785_2.00_fwd.png) VYTAATKAYN |
![](data/2.00/DataFiles/Logos/Files/M03785_2.00_rev.png) NRTMATTARB |
SELEX
Nitta et al.(2015)
Dfd_2
|
0.644
|
0.842
|
Dfd
M06481_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06481_2.00_fwd.png) YTAATGA |
![](data/2.00/DataFiles/Logos/Files/M06481_2.00_rev.png) TCATTAR |
B1H
Mathelier et al.(2014)
MA0186.1
|
0.644
|
0.842
|
Dfd
M06226_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06226_2.00_fwd.png) VYTAATGA |
![](data/2.00/DataFiles/Logos/Files/M06226_2.00_rev.png) TCATTAAB |
B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439
|
0.644
|
0.842
|
Dfd
M06227_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06227_2.00_fwd.png) TTAATKRY |
![](data/2.00/DataFiles/Logos/Files/M06227_2.00_rev.png) RYMATTAA |
B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439
|
0.644
|
0.842
|
Dfd
M06228_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06228_2.00_fwd.png) NBTAATKR |
![](data/2.00/DataFiles/Logos/Files/M06228_2.00_rev.png) YMATTAVN |
B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439
|
0.644
|
0.842
|
Dfd
M09675_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M09675_2.00_fwd.png) TTAATKRB |
![](data/2.00/DataFiles/Logos/Files/M09675_2.00_rev.png) VYMATTAA |
Misc
Kulakovskiy et al.(2009)
Dfd
|
0.644
|
0.842
|
Dfd
M10784_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M10784_2.00_fwd.png) NNNNRKTAATNNNNNN |
![](data/2.00/DataFiles/Logos/Files/M10784_2.00_rev.png) NNNNNNATTAMYNNNN |
Transfac
Matys et al.(2006)
I$DFD_01
|
0.644
|
0.842
|
SPU_026099
M02175_2.00 |
Strongylocentrotus purpuratus |
![](data/2.00/DataFiles/Logos/Files/M02175_2.00_fwd.png) KTAATTRB |
![](data/2.00/DataFiles/Logos/Files/M02175_2.00_rev.png) VYAATTAM |
PBM
Weirauch et al.(2014)
pTH6140
|
0.638
|
0.754
|
Pdx1
M00446_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00446_2.00_fwd.png) NWRAYNNN |
![](data/2.00/DataFiles/Logos/Files/M00446_2.00_rev.png) NNNRTYWN |
PBM
Berger et al.(2008)
Ipf1_3815
|
0.638
|
0.719
|
PDX1
M03155_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M03155_2.00_fwd.png) NTAATTRNNNYTAATTRN |
![](data/2.00/DataFiles/Logos/Files/M03155_2.00_rev.png) NYAATTARNNNYAATTAN |
SELEX
Jolma et al.(2013)
PDX1_1
|
0.638
|
0.719
|
PDX1
M03156_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M03156_2.00_fwd.png) BTAATKRN |
![](data/2.00/DataFiles/Logos/Files/M03156_2.00_rev.png) NYMATTAV |
SELEX
Jolma et al.(2013)
PDX1_2
|
0.638
|
0.719
|
PDX1
M05161_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05161_2.00_fwd.png) YTAATKRB |
![](data/2.00/DataFiles/Logos/Files/M05161_2.00_rev.png) VYMATTAR |
SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX
|
0.638
|
0.719
|
PDX1
M09147_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M09147_2.00_fwd.png) TGATWGATK |
![](data/2.00/DataFiles/Logos/Files/M09147_2.00_rev.png) MATCWATCA |
Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A
|
0.638
|
0.719
|
Pdx1
M09192_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M09192_2.00_fwd.png) VYTAATGRB |
![](data/2.00/DataFiles/Logos/Files/M09192_2.00_rev.png) VYCATTARB |
Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B
|
0.638
|
0.719
|
Pdx1
M09571_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M09571_2.00_fwd.png) TGATTRATKR |
![](data/2.00/DataFiles/Logos/Files/M09571_2.00_rev.png) YMATYAATCA |
Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281
|
0.638
|
0.719
|
PDX1
M10699_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_01
|
0.638
|
0.719
|
PDX1
M10700_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_02
|
0.638
|
0.719
|
PDX1
M10701_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_03
|
0.638
|
0.719
|
PDX1
M10702_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_04
|
0.638
|
0.719
|
PDX1
M10703_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_05
|
0.638
|
0.719
|
PDX1
M10704_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_Q4_01
|
0.638
|
0.719
|
PDX1
M10705_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_Q4
|
0.638
|
0.719
|
PDX1
M10706_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_Q5_01
|
0.638
|
0.719
|
PDX1
M10707_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_Q5
|
0.638
|
0.719
|
PDX1
M10708_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_Q6
|
0.638
|
0.719
|
PDX1
M05162_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05162_2.00_fwd.png) HTAAYGAB |
![](data/2.00/DataFiles/Logos/Files/M05162_2.00_rev.png) VTCRTTAD |
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1
|
0.638
|
0.719
|
PDX1
M05163_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05163_2.00_fwd.png) YTAATKRB |
![](data/2.00/DataFiles/Logos/Files/M05163_2.00_rev.png) VYMATTAR |
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2
|
0.638
|
0.719
|
Q0N4M8_NEMVE
M02166_2.00 |
Nematostella vectensis |
![](data/2.00/DataFiles/Logos/Files/M02166_2.00_fwd.png) HTAATKAC |
![](data/2.00/DataFiles/Logos/Files/M02166_2.00_rev.png) GTMATTAD |
PBM
Weirauch et al.(2014)
pTH6215
|
0.623
|
0.737
|
Hoxd3
M00531_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00531_2.00_fwd.png) NTAATNDN |
![](data/2.00/DataFiles/Logos/Files/M00531_2.00_rev.png) NHNATTAN |
PBM
Berger et al.(2008)
Hoxd3_1742
|
0.622
|
0.737
|
Hoxa3
M00172_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00172_2.00_fwd.png) NTAATKRNNN |
![](data/2.00/DataFiles/Logos/Files/M00172_2.00_rev.png) NNNYMATTAN |
PBM
Badis et al.(2009)
Hoxa3_2783
|
0.622
|
0.737
|
Hoxa3
M00532_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00532_2.00_fwd.png) NTAATKRNN |
![](data/2.00/DataFiles/Logos/Files/M00532_2.00_rev.png) NNYMATTAN |
PBM
Berger et al.(2008)
Hoxa3_2783
|
0.622
|
0.737
|
Hoxd3
M03287_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M03287_2.00_fwd.png) NNTAATKRNN |
![](data/2.00/DataFiles/Logos/Files/M03287_2.00_rev.png) NNYMATTANN |
SELEX
Jolma et al.(2013)
Hoxd3_1
|
0.622
|
0.737
|
HOXD3
M05101_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05101_2.00_fwd.png) CTAATTAS |
![](data/2.00/DataFiles/Logos/Files/M05101_2.00_rev.png) STAATTAG |
SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX
|
0.622
|
0.737
|
HOXA3
M10651_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M10651_2.00_fwd.png) SVTWNDDKB |
![](data/2.00/DataFiles/Logos/Files/M10651_2.00_rev.png) VMHHNWABS |
Transfac
Matys et al.(2006)
V$HOXA3_01
|
0.622
|
0.737
|
HOXD3
M05102_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05102_2.00_fwd.png) YTAAYGAY |
![](data/2.00/DataFiles/Logos/Files/M05102_2.00_rev.png) RTCRTTAR |
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1
|
0.622
|
0.737
|
HOXD3
M05103_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05103_2.00_fwd.png) CTAATKAC |
![](data/2.00/DataFiles/Logos/Files/M05103_2.00_rev.png) GTMATTAG |
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2
|
0.622
|
0.737
|
Hoxb3
M00504_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00504_2.00_fwd.png) NTAATKRNN |
![](data/2.00/DataFiles/Logos/Files/M00504_2.00_rev.png) NNYMATTAN |
PBM
Berger et al.(2008)
Hoxb3_1720
|
0.622
|
0.719
|
HOXB3
M03126_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M03126_2.00_fwd.png) NBTAATKRNN |
![](data/2.00/DataFiles/Logos/Files/M03126_2.00_rev.png) NNYMATTAVN |
SELEX
Jolma et al.(2013)
HOXB3_1
|
0.622
|
0.719
|
lin-39
M08211_2.00 |
Caenorhabditis elegans |
![](data/2.00/DataFiles/Logos/Files/M08211_2.00_fwd.png) GATTGATG |
![](data/2.00/DataFiles/Logos/Files/M08211_2.00_rev.png) CATCAATC |
ChIP-seq
Contrino et al.(2012)
Mw154
|
0.618
|
0.754
|
lin-39
M09582_2.00 |
Caenorhabditis elegans |
![](data/2.00/DataFiles/Logos/Files/M09582_2.00_fwd.png) DTGATWRATK |
![](data/2.00/DataFiles/Logos/Files/M09582_2.00_rev.png) MATYWATCAH |
Misc
Heinz et al.(2010)
cElegans.L3-LIN39_modEncode
|
0.618
|
0.754
|
zen
M03805_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M03805_2.00_fwd.png) BTAATKRB |
![](data/2.00/DataFiles/Logos/Files/M03805_2.00_rev.png) VYMATTAV |
SELEX
Nitta et al.(2015)
zen_1
|
0.617
|
0.649
|
zen
M06500_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06500_2.00_fwd.png) YTAATKA |
![](data/2.00/DataFiles/Logos/Files/M06500_2.00_rev.png) TMATTAR |
B1H
Mathelier et al.(2014)
MA0256.1
|
0.617
|
0.649
|
zen
M06276_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06276_2.00_fwd.png) NBYTAATKA |
![](data/2.00/DataFiles/Logos/Files/M06276_2.00_rev.png) TMATTARBN |
B1H
Zhu et al.(2011)
Zen_Cell_FBgn0004053
|
0.617
|
0.649
|
zen
M06277_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06277_2.00_fwd.png) AANWTWAWTG |
![](data/2.00/DataFiles/Logos/Files/M06277_2.00_rev.png) CAWTWAWNTT |
B1H
Zhu et al.(2011)
zen_FlyReg_FBgn0004053
|
0.617
|
0.649
|
zen
M06278_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06278_2.00_fwd.png) NYTAATKA |
![](data/2.00/DataFiles/Logos/Files/M06278_2.00_rev.png) TMATTARN |
B1H
Zhu et al.(2011)
Zen_SOLEXA_FBgn0004053
|
0.617
|
0.649
|
zen2
M02118_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M02118_2.00_fwd.png) NNTAATKRNN |
![](data/2.00/DataFiles/Logos/Files/M02118_2.00_rev.png) NNYMATTANN |
PBM
Weirauch et al.(2014)
pTH5479
|
0.616
|
0.649
|
zen2
M03806_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M03806_2.00_fwd.png) BTAATKAS |
![](data/2.00/DataFiles/Logos/Files/M03806_2.00_rev.png) STMATTAV |
SELEX
Nitta et al.(2015)
zen2_1
|
0.616
|
0.649
|
zen2
M03807_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M03807_2.00_fwd.png) BTAATKWNNVRNNNNYBNNWMATTAV |
![](data/2.00/DataFiles/Logos/Files/M03807_2.00_rev.png) BTAATKWNNVRNNNNYBNNWMATTAV |
SELEX
Nitta et al.(2015)
zen2_2
|
0.616
|
0.649
|
zen2
M06501_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06501_2.00_fwd.png) BTAATKA |
![](data/2.00/DataFiles/Logos/Files/M06501_2.00_rev.png) TMATTAV |
B1H
Mathelier et al.(2014)
MA0257.1
|
0.616
|
0.649
|
zen2
M06279_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06279_2.00_fwd.png) HNBTAATKA |
![](data/2.00/DataFiles/Logos/Files/M06279_2.00_rev.png) TMATTAVND |
B1H
Zhu et al.(2011)
Zen2_Cell_FBgn0004054
|
0.616
|
0.649
|
zen2
M06280_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06280_2.00_fwd.png) NNNTAATKRN |
![](data/2.00/DataFiles/Logos/Files/M06280_2.00_rev.png) NYMATTANNN |
B1H
Zhu et al.(2011)
zen2_SOLEXA_2_FBgn0004054
|
0.616
|
0.649
|
zen2
M06281_2.00 |
Drosophila melanogaster |
![](data/2.00/DataFiles/Logos/Files/M06281_2.00_fwd.png) YTAATKR |
![](data/2.00/DataFiles/Logos/Files/M06281_2.00_rev.png) YMATTAR |
B1H
Zhu et al.(2011)
Zen2_SOLEXA_FBgn0004054
|
0.616
|
0.649
|
HOXC4
M00329_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M00329_2.00_fwd.png) NTAATKRNN |
![](data/2.00/DataFiles/Logos/Files/M00329_2.00_rev.png) NNYMATTAN |
PBM
Barrera et al.(2016)
HOXC4_R158L
|
0.613
|
0.842
|
Q9GP48_9TURB
M02217_2.00 |
Discocelis tigrina |
![](data/2.00/DataFiles/Logos/Files/M02217_2.00_fwd.png) DTAATTAB |
![](data/2.00/DataFiles/Logos/Files/M02217_2.00_rev.png) VTAATTAH |
PBM
Weirauch et al.(2014)
pTH6515
|
0.606
|
0.596
|
Q24780_9CNID
M02205_2.00 |
Eleutheria dichotoma |
![](data/2.00/DataFiles/Logos/Files/M02205_2.00_fwd.png) NNYTAATTAMN |
![](data/2.00/DataFiles/Logos/Files/M02205_2.00_rev.png) NKTAATTARNN |
PBM
Weirauch et al.(2014)
pTH6308
|
0.601
|
0.614
|
Hoxc9
M00470_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00470_2.00_fwd.png) NGTAATWAAN |
![](data/2.00/DataFiles/Logos/Files/M00470_2.00_rev.png) NTTWATTACN |
PBM
Berger et al.(2008)
Hoxc9_2367
|
0.599
|
0.719
|
Hoxd9
M03282_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M03282_2.00_fwd.png) TTTWATKKB |
![](data/2.00/DataFiles/Logos/Files/M03282_2.00_rev.png) VMMATWAAA |
SELEX
Jolma et al.(2013)
Hoxd9_1
|
0.599
|
0.719
|
Hoxd9
M03283_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M03283_2.00_fwd.png) DWTTWATKRY |
![](data/2.00/DataFiles/Logos/Files/M03283_2.00_rev.png) RYMATWAAWH |
SELEX
Jolma et al.(2013)
Hoxd9_2
|
0.599
|
0.719
|
Hoxd9
M03284_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M03284_2.00_fwd.png) DTTWAYGRB |
![](data/2.00/DataFiles/Logos/Files/M03284_2.00_rev.png) VYCRTWAAH |
SELEX
Jolma et al.(2013)
Hoxd9_3
|
0.599
|
0.719
|
HOXC9
M05331_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05331_2.00_fwd.png) GTCGTAAAAN |
![](data/2.00/DataFiles/Logos/Files/M05331_2.00_rev.png) NTTTTACGAC |
SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_1
|
0.599
|
0.719
|
HOXC9
M05332_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05332_2.00_fwd.png) NTTTTATKRC |
![](data/2.00/DataFiles/Logos/Files/M05332_2.00_rev.png) GYMATAAAAN |
SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_2
|
0.599
|
0.719
|
HOXD9
M05104_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05104_2.00_fwd.png) NTTTTATKRC |
![](data/2.00/DataFiles/Logos/Files/M05104_2.00_rev.png) GYMATAAAAN |
SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_1
|
0.599
|
0.719
|
HOXD9
M05105_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05105_2.00_fwd.png) RTCRTAAAWN |
![](data/2.00/DataFiles/Logos/Files/M05105_2.00_rev.png) NWTTTAYGAY |
SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_2
|
0.599
|
0.719
|
HOXD9
M05108_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05108_2.00_fwd.png) RTCGTAAAWN |
![](data/2.00/DataFiles/Logos/Files/M05108_2.00_rev.png) NWTTTACGAY |
SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_1
|
0.599
|
0.719
|
HOXD9
M05109_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05109_2.00_fwd.png) NTTTTATKRC |
![](data/2.00/DataFiles/Logos/Files/M05109_2.00_rev.png) GYMATAAAAN |
SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_2
|
0.599
|
0.719
|
Hoxc9
M08137_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M08137_2.00_fwd.png) NWGATTTATDGSH |
![](data/2.00/DataFiles/Logos/Files/M08137_2.00_rev.png) DSCHATAAATCWN |
ChIP-seq
Mathelier et al.(2014)
MA0485.1
|
0.599
|
0.719
|
HOXC9
M09161_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M09161_2.00_fwd.png) HTTWATKGCH |
![](data/2.00/DataFiles/Logos/Files/M09161_2.00_rev.png) DGCMATWAAD |
Misc
Kulakovskiy et al.(2013)
HXC9_HUMAN.H11MO.0.C
|
0.599
|
0.719
|
Hoxc9
M09574_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M09574_2.00_fwd.png) TGATTTATDGCH |
![](data/2.00/DataFiles/Logos/Files/M09574_2.00_rev.png) DGCHATAAATCA |
Misc
Heinz et al.(2010)
Ainv15-Hoxc9_GSE21812
|
0.599
|
0.719
|
HOXD9
M10686_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXD9_Q2
|
0.599
|
0.719
|
HOXC9
M05333_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05333_2.00_fwd.png) RTCGTAAAHN |
![](data/2.00/DataFiles/Logos/Files/M05333_2.00_rev.png) NDTTTACGAY |
SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_1
|
0.599
|
0.719
|
HOXC9
M05334_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05334_2.00_fwd.png) NTTTWATKRC |
![](data/2.00/DataFiles/Logos/Files/M05334_2.00_rev.png) GYMATWAAAN |
SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_2
|
0.599
|
0.719
|
HOXD9
M05106_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05106_2.00_fwd.png) NNTTWATKRC |
![](data/2.00/DataFiles/Logos/Files/M05106_2.00_rev.png) GYMATWAANN |
SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_1
|
0.599
|
0.719
|
HOXD9
M05107_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05107_2.00_fwd.png) RTCGTAAANN |
![](data/2.00/DataFiles/Logos/Files/M05107_2.00_rev.png) NNTTTACGAY |
SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_2
|
0.599
|
0.719
|
HOXD9
M05110_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05110_2.00_fwd.png) RTCGTAAANN |
![](data/2.00/DataFiles/Logos/Files/M05110_2.00_rev.png) NNTTTACGAY |
SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_1
|
0.599
|
0.719
|
HOXD9
M05111_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05111_2.00_fwd.png) NDTTWATKRC |
![](data/2.00/DataFiles/Logos/Files/M05111_2.00_rev.png) GYMATWAAHN |
SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_2
|
0.599
|
0.719
|
Hoxb9
M00410_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00410_2.00_fwd.png) NTTWAYDDNN |
![](data/2.00/DataFiles/Logos/Files/M00410_2.00_rev.png) NNHHRTWAAN |
PBM
Berger et al.(2008)
Hoxb9_3413
|
0.599
|
0.702
|
Hoxa9
M00475_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M00475_2.00_fwd.png) NNDDBNNN |
![](data/2.00/DataFiles/Logos/Files/M00475_2.00_rev.png) NNNVHHNN |
PBM
Berger et al.(2008)
Hoxa9_2622
|
0.599
|
0.702
|
HOXA9
M03085_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M03085_2.00_fwd.png) NNDTTWAYGAYN |
![](data/2.00/DataFiles/Logos/Files/M03085_2.00_rev.png) NRTCRTWAAHNN |
SELEX
Jolma et al.(2013)
HOXA10_1
|
0.599
|
0.702
|
HOXA9
M03086_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M03086_2.00_fwd.png) NDTTWATKRYN |
![](data/2.00/DataFiles/Logos/Files/M03086_2.00_rev.png) NRYMATWAAHN |
SELEX
Jolma et al.(2013)
HOXA10_2
|
0.599
|
0.702
|
HOXA9
M04932_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04932_2.00_fwd.png) NNDWWABKRC |
![](data/2.00/DataFiles/Logos/Files/M04932_2.00_rev.png) GYMVTWWHNN |
SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_1
|
0.599
|
0.702
|
HOXA9
M04933_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04933_2.00_fwd.png) NNDTWAYGRB |
![](data/2.00/DataFiles/Logos/Files/M04933_2.00_rev.png) VYCRTWAHNN |
SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_2
|
0.599
|
0.702
|
HOXB9
M05289_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05289_2.00_fwd.png) RTCRTAAAWN |
![](data/2.00/DataFiles/Logos/Files/M05289_2.00_rev.png) NWTTTAYGAY |
SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_1
|
0.599
|
0.702
|
HOXB9
M05290_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05290_2.00_fwd.png) NTTTWATKRC |
![](data/2.00/DataFiles/Logos/Files/M05290_2.00_rev.png) GYMATWAAAN |
SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_2
|
0.599
|
0.702
|
Hoxa9
M08138_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M08138_2.00_fwd.png) TGATTKATKRB |
![](data/2.00/DataFiles/Logos/Files/M08138_2.00_rev.png) VYMATMAATCA |
ChIP-seq
Mathelier et al.(2014)
MA0594.1
|
0.599
|
0.702
|
HOXA9
M09130_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M09130_2.00_fwd.png) DCATAAAYYRBH |
![](data/2.00/DataFiles/Logos/Files/M09130_2.00_rev.png) DVYRRTTTATGH |
Misc
Kulakovskiy et al.(2013)
HXA10_HUMAN.H11MO.0.C
|
0.599
|
0.702
|
HOXA9
M09131_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M09131_2.00_fwd.png) HHATAAATCAH |
![](data/2.00/DataFiles/Logos/Files/M09131_2.00_rev.png) DTGATTTATDD |
Misc
Kulakovskiy et al.(2013)
HXA9_HUMAN.H11MO.0.B
|
0.599
|
0.702
|
Hoxa9
M09203_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M09203_2.00_fwd.png) HHATAAATCAH |
![](data/2.00/DataFiles/Logos/Files/M09203_2.00_rev.png) DTGATTTATDD |
Misc
Kulakovskiy et al.(2013)
HXA9_MOUSE.H11MO.0.B
|
0.599
|
0.702
|
Hoxa9
M09575_2.00 |
Mus musculus |
![](data/2.00/DataFiles/Logos/Files/M09575_2.00_fwd.png) WGATTKATDRBY |
![](data/2.00/DataFiles/Logos/Files/M09575_2.00_rev.png) RVYHATMAATCW |
Misc
Heinz et al.(2010)
HSC-Hoxa9_GSE33509
|
0.599
|
0.702
|
HOXA9
M10642_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA10_Q6
|
0.599
|
0.702
|
HOXA9
M10643_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA9_04
|
0.599
|
0.702
|
HOXA9
M10644_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA9_Q5_01
|
0.599
|
0.702
|
HOXA9
M10645_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA9_Q5
|
0.599
|
0.702
|
HOXB9
M05291_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M05291_2.00_fwd.png) GTCGTAAAHB |
![](data/2.00/DataFiles/Logos/Files/M05291_2.00_rev.png) VDTTTACGAC |
SELEX
Yin et al.(2017)
HOXB9_eDBD_Methyl-HT-SELEX
|
0.599
|
0.702
|
HOXA9
M04934_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04934_2.00_fwd.png) NNDTWAYKRC |
![](data/2.00/DataFiles/Logos/Files/M04934_2.00_rev.png) GYMRTWAHNN |
SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_1
|
0.599
|
0.702
|
HOXA9
M04935_2.00 |
Homo sapiens |
![](data/2.00/DataFiles/Logos/Files/M04935_2.00_fwd.png) NNDTWACGAY |
![](data/2.00/DataFiles/Logos/Files/M04935_2.00_rev.png) RTCGTWAHNN |
SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_2
|
0.599
|
0.702
|
For this family, TFs with SR scores > 0.599 will likely have a similar motif |