CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMEUG00000008376
(
Macropus eugenii
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSMEUG00000008376
T211378_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Irx2
M00386_2.00
Mus musculus
NNDACAHNN
NNDTGTHNN
PBM
Berger et al.(2008)
Irx2_0900
0.867
1.000
Irx5
M00455_2.00
Mus musculus
NNNDACAHN
NDTGTHNNN
PBM
Berger et al.(2008)
Irx5_2385
0.867
1.000
IRX2
M03212_2.00
Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX2_1
0.867
1.000
IRX5
M03222_2.00
Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX5_1
0.867
1.000
IRX5
M05315_2.00
Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN
SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX
0.867
1.000
IRX5
M05316_2.00
Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW
SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX
0.867
1.000
ara
M06518_2.00
Drosophila melanogaster
WWACA
TGTWW
B1H
Mathelier et al.(2014)
MA0210.1
0.815
0.930
ara
M06313_2.00
Drosophila melanogaster
TGTWWWNN
NNWWWACA
B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904
0.815
0.930
ara
M06314_2.00
Drosophila melanogaster
DWWACA
TGTWWH
B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904
0.815
0.930
caup
M06519_2.00
Drosophila melanogaster
WAACA
TGTTW
B1H
Mathelier et al.(2014)
MA0217.1
0.806
0.877
caup
M06315_2.00
Drosophila melanogaster
HWDWAACA
TGTTWHWD
B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919
0.806
0.877
caup
M06316_2.00
Drosophila melanogaster
NDDACA
TGTHHN
B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919
0.806
0.877
Irx4
M00416_2.00
Mus musculus
NNNDAMAH
DTKTHNNN
PBM
Berger et al.(2008)
Irx4_2242
0.780
0.877
Irx6
M00456_2.00
Mus musculus
NNDAHWN
NWDTHNN
PBM
Berger et al.(2008)
Irx6_2623
0.780
0.860
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000007647
Homeodomain
114
173
PAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK
Links
Other
Homeodomain
family TFs
Other
Macropus eugenii
TFs
387 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PITG_04694
Phytophthora infestans
PITG_04694
N
maker-pve_contig_563-fgenesh-gene-0.8
Pythium vexans
maker-pve_contig_563-fgenesh-gene-0.8
N
Phyra75440
Phytophthora ramorum
Phyra75440
N
Phyra85808
Phytophthora ramorum
Phyra85808
N
Physo138014
Phytophthora sojae
Physo138014
N
Physo142188
Phytophthora sojae
Physo142188
N
Physo142190
Phytophthora sojae
Physo142190
N
Physo142191
Phytophthora sojae
Physo142191
N
Physo142192
Phytophthora sojae
Physo142192
N
maker-pve_contig_1305-fgenesh-gene-0.0
Pythium vexans
maker-pve_contig_1305-fgenesh-gene-0.0
N
PITG_04700
Phytophthora infestans
PITG_04700
N
PITG_20387
Phytophthora infestans
PITG_20387
N
PYU1_G007486
Pythium ultimum
PYU1_G007486
N
PYU1_G007487
Pythium ultimum
PYU1_G007487
N
e_gw1.457.7.1
Phytophthora capsici
e_gw1.457.7.1
N
fgenesh1_pg.C_scaffold_17000111
Phytophthora capsici
fgenesh1_pg.C_scaffold_17000111
N
fgenesh1_pm.C_scaffold_10000249
Phytophthora capsici
fgenesh1_pm.C_scaffold_10000249
N
maker-pag1_scaffold_526-fgenesh-gene-0.3
Pythium aphanidermatum
maker-pag1_scaffold_526-fgenesh-gene-0.3
N
ALNC14_110220
Albugo laibachii
ALNC14_110220
N
F443_08033
Phytophthora parasitica
F443_08033
N
F443_15764
Phytophthora parasitica
F443_15764
N
F443_15766
Phytophthora parasitica
F443_15766
N
fgenesh_scip_prom.28083.12007
Phytophthora lateralis
fgenesh_scip_prom.28083.12007
N
fgenesh_scip_prom.28083.5336
Phytophthora lateralis
fgenesh_scip_prom.28083.5336
N
fgenesh_scip_prom.46568.6540
Phytophthora kernoviae
fgenesh_scip_prom.46568.6540
N
fgenesh_scip_prom.46568.9529
Phytophthora kernoviae
fgenesh_scip_prom.46568.9529
N
ALNC14_036480
Albugo laibachii
ALNC14_036480
N
maker-pag1_scaffold_539-snap-gene-0.8
Pythium aphanidermatum
maker-pag1_scaffold_539-snap-gene-0.8
N
maker-pag1_scaffold_785-snap-gene-0.4
Pythium aphanidermatum
maker-pag1_scaffold_785-snap-gene-0.4
N
maker-par_contig_2316-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_2316-fgenesh-gene-0.0
N
maker-pir_contig_1338-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_1338-fgenesh-gene-0.2
N
maker-pir_contig_4474-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_4474-fgenesh-gene-0.0
N
maker-pir_contig_636-snap-gene-0.12
Pythium irregulare
maker-pir_contig_636-snap-gene-0.12
N
maker-piw_contig_10342-snap-gene-0.1
Pythium iwayamai
maker-piw_contig_10342-snap-gene-0.1
N