CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Rhox8
(
Rattus norvegicus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSRNOG00000031534
T215465_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Rhox8
M02103_2.00
Rattus norvegicus
NGGTGTWAH
DTWACACCN
PBM
Weirauch et al.(2014)
pTH6071
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02103_2.00
Homeodomain
1
57
SRNRHRFTEFQLQELERIFERNHYPSAAARRELARWIGVTESRVENWFKSRRAKYRK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000041820
Homeodomain
143
199
SRNRHRFTEFQLQELERIFERNHYPSAAARRELARWIGVTESRVENWFKSRRAKYRK
Links
Other
Homeodomain
family TFs
Other
Rattus norvegicus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Scas_Contig597.4
Saccharomyces castellii
Scas_Contig597.4
I
NCAS_0H01240
Naumovozyma castellii
NCAS_0H01240
I
HMPREF1120_05596
Exophiala dermatitidis
HMPREF1120_05596
I
F503_08421
Ophiostoma piceae uamh
F503_08421
I
PV06_11257
Exophiala oligosperma
PV06_11257
N
MGG_14816
Magnaporthe oryzae
MGG_14816
N
MGU_09044
Metarhizium guizhouense
MGU_09044
N
NechaG86758
Fusarium solani
NechaG86758
N
NechaG88155
Fusarium solani
NechaG88155
N
PCH_Pc13g03330
Penicillium rubens
PCH_Pc13g03330
N
PEX1_062920
Penicillium expansum
PEX1_062920
N
PFICI_00049
Pestalotiopsis fici
PFICI_00049
N
PV04_07764
Capronia semiimmersa
PV04_07764
N
PV05_06916
Exophiala xenobiotica
PV05_06916
N
PV06_07837
Exophiala oligosperma
PV06_07837
N
MAJ_08159
Metarhizium majus
MAJ_08159
N
PV06_11661
Exophiala oligosperma
PV06_11661
N
PV06_11680
Exophiala oligosperma
PV06_11680
N
PV08_03231
Exophiala spinifera
PV08_03231
N
SETTUDRAFT_92771
Setosphaeria turcica
SETTUDRAFT_92771
N
SNOG_11030
Phaeosphaeria nodorum
SNOG_11030
N
SS1G_05808
Sclerotinia sclerotiorum
SS1G_05808
N
U727_00432581551
Penicillium solitum
U727_00432581551
N
VHEMI00089
Torrubiella hemipterigena
VHEMI00089
N
X797_009392
Metarhizium robertsii
X797_009392
N
estExt_Genewise1Plus.C_70733
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_70733
N
fgenesh1_pg.sca_32_chr11_3_0000153
Nectria haematococca
fgenesh1_pg.sca_32_chr11_3_0000153
N
Pc13g03330
Penicillium chrysogenum
Pc13g03330
N
COCVIDRAFT_107313
Bipolaris victoriae
COCVIDRAFT_107313
N
A1O1_02535
Capronia coronata
A1O1_02535
N
CADAFLAG00003334
Aspergillus flavus
CADAFLAG00003334
N
ANIA_01584
Aspergillus nidulans
CADANIAG00008217
N
ATEG_06092
Aspergillus terreus
CADATEAG00000839
N
CFIO01_01654
Colletotrichum fioriniae
CFIO01_01654
N
COCC4DRAFT_130965
Bipolaris maydis
COCC4DRAFT_130965
N
COCC4DRAFT_157715
Bipolaris maydis
COCC4DRAFT_157715
N
COCCADRAFT_34908
Bipolaris zeicola
COCCADRAFT_34908
N
COCCADRAFT_40088
Bipolaris zeicola
COCCADRAFT_40088
N
COCMIDRAFT_30122
Bipolaris oryzae
COCMIDRAFT_30122
N
COCSADRAFT_130198
Bipolaris sorokiniana
COCSADRAFT_130198
N
COCSADRAFT_34052
Bipolaris sorokiniana
COCSADRAFT_34052
N
MBR_08966
Metarhizium brunneum
MBR_08966
N
COCVIDRAFT_20793
Bipolaris victoriae
COCVIDRAFT_20793
N
EURHEDRAFT_415639
Aspergillus ruber
EURHEDRAFT_415639
N
H072_3849
Dactylellina haptotyla
H072_3849
N
HMPREF1624_03990
Sporothrix schenckii
HMPREF1624_03990
N
KUCA_T00003114001
Kuraishia capsulata
KUCA_T00003114001
N
KUCA_T00003117001
Kuraishia capsulata
KUCA_T00003117001
N
KUCA_T00003984001
Kuraishia capsulata
KUCA_T00003984001
N
KUCA_T00005495001
Kuraishia capsulata
KUCA_T00005495001
N
LEMA_P012820.1
Leptosphaeria maculans
LEMA_P012820.1
N
MAC_06969
Metarhizium acridum
MAC_06969
N
SNOG_11030
Stagonospora nodorum
SNOG_11030
N