irx2a (Takifugu rubripes)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTRUG00000001420 T216617_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.866 0.982
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.866 0.982
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.866 0.982
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.866 0.982
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.866 0.982
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.866 0.982
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.814 0.912
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.814 0.912
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.814 0.912
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.806 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.806 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.781 0.895
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.780 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000003267 Homeodomain 142 201
ENSTRUP00000003268 Homeodomain 112 171
ENSTRUP00000003269 Homeodomain 112 171

Links

Other Homeodomain family TFs
Other Takifugu rubripes TFs

380 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WT1 Homo sapiens ENSG00000184937 D
Wt1 Mus musculus ENSMUSG00000016458 D
ENSPPYG00000029822 Pongo abelii ENSPPYG00000029822 I
WT1 Taeniopygia guttata ENSTGUG00000004906 I
ENSSTOG00000023716 Ictidomys tridecemlineatus ENSSTOG00000023716 I
WT1 Sus scrofa ENSSSCG00000013316 I
ENSSHAG00000017390 Sarcophilus harrisii ENSSHAG00000017390 I
ENSSARG00000000207 Sorex araneus ENSSARG00000000207 I
Wt1 Rattus norvegicus ENSRNOG00000013074 I
WT1 Pan troglodytes ENSPTRG00000003476 I
ENSPSIG00000013679 Pelodiscus sinensis ENSPSIG00000013679 I
wt1b Tetraodon nigroviridis ENSTNIG00000013806 I
ENSPMAG00000008950 Petromyzon marinus ENSPMAG00000008950 I
ENSPFOG00000010572 Poecilia formosa ENSPFOG00000010572 I
WT1 Procavia capensis ENSPCAG00000002213 I
ENSPANG00000019482 Papio anubis ENSPANG00000019482 I
wt1 Oryzias latipes ENSORLG00000012424 I
wt1 Oryzias latipes ENSORLG00000009859 I
ENSOPRG00000015709 Ochotona princeps ENSOPRG00000015709 I
ENSONIG00000011043 Oreochromis niloticus ENSONIG00000011043 I
Gfo_R001970 Geospiza fortis Gfo_R001970 I
wt1.S Xenopus laevis XB-GENE-864792 I
wt1.L Xenopus laevis XB-GENE-6252376 I
wt1 Xenopus tropicalis XB-GENE-484999 I
B7ZSG3 Xenopus laevis B7ZSG3 I
B5DE03 Xenopus tropicalis B5DE03 I
fgenesh2_pm.scaffold_110000013 Branchiostoma floridae fgenesh2_pm.scaffold_110000013 I
fgenesh2_pg.scaffold_80000039 Branchiostoma floridae fgenesh2_pg.scaffold_80000039 I
Pvit_09510 Pogona vitticeps Pvit_09510 I
WT1 Otolemur garnettii ENSOGAG00000007118 I
ENSP00000331327 Macaca fascicularis ENSP00000331327 I
ENSP00000331327-D1 Bos grunniens ENSP00000331327-D1 I
Alligator_sinensis_CCG012951.1 Alligator sinensis Alligator_sinensis_CCG012951.1 I
Afo_R014628 Aptenodytes forsteri Afo_R014628 I
Aan_R006616 Calypte anna Aan_R006616 I
ENSXMAG00000005139 Xiphophorus maculatus ENSXMAG00000005139 I
ENSVPAG00000007788 Vicugna pacos ENSVPAG00000007788 I
wt1b Takifugu rubripes ENSTRUG00000006559 I
wt1a Danio rerio ENSDARG00000031420 I
wt1b Gasterosteus aculeatus ENSGACG00000016020 I
WT1 Felis catus ENSFCAG00000000308 I
ENSFALG00000010820 Ficedula albicollis ENSFALG00000010820 I
WT1 Echinops telfairi ENSETEG00000000684 I
ENSEEUG00000007221 Erinaceus europaeus ENSEEUG00000007221 I
ENSECAG00000022308 Equus caballus ENSECAG00000022308 I
Wt1 Dipodomys ordii ENSDORG00000013725 I
WT1 Dasypus novemcinctus ENSDNOG00000003652 I
WT1 Gallus gallus ENSGALG00000012115 I
wt1b Danio rerio ENSDARG00000007990 I
WT1 Callithrix jacchus ENSCJAG00000005900 I
WT1 Choloepus hoffmanni ENSCHOG00000006244 I
WT1 Canis familiaris ENSCAFG00000007426 I
WT1 Bos taurus ENSBTAG00000047268 I
ENSAPLG00000005775 Anas platyrhynchos ENSAPLG00000005775 I
ENSAMXG00000013017 Astyanax mexicanus ENSAMXG00000013017 I
ENSAMEG00000006957 Ailuropoda melanoleuca ENSAMEG00000006957 I
WT1 Myotis lucifugus ENSMLUG00000027523 I
ENSACAG00000002480 Anolis carolinensis ENSACAG00000002480 I
WT1 Oryctolagus cuniculus ENSOCUG00000005882 I
ENSOARG00000016334 Ovis aries ENSOARG00000016334 I
ENSOANG00000015147 Ornithorhynchus anatinus ENSOANG00000015147 I
ENSNLEG00000017890 Nomascus leucogenys ENSNLEG00000017890 I
ENSMPUG00000011307 Mustela putorius furo ENSMPUG00000011307 I
WT1 Monodelphis domestica ENSMODG00000009646 I
WT1 Macaca mulatta ENSMMUG00000009881 I
ENSONIG00000005545 Oreochromis niloticus ENSONIG00000005545 I
WT1 Microcebus murinus ENSMICG00000004097 I
ENSMGAG00000001489 Meleagris gallopavo ENSMGAG00000001489 I
ENSLOCG00000004537 Lepisosteus oculatus ENSLOCG00000004537 I
WT1 Loxodonta africana ENSLAFG00000006160 I
ENSLACG00000016378 Latimeria chalumnae ENSLACG00000016378 I
ENSGMOG00000012296 Gadus morhua ENSGMOG00000012296 I
WT1 Gorilla gorilla ENSGGOG00000011586 I