CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DUXA
(
Tursiops truncatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSTTRG00000014200
T217030_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DUXA
M01247_2.00
Homo sapiens
NTGATTRNN
NNYAATCAN
PBM
Lambert et al.(2019)
pTH11226
0.818
0.798
DUXA
M03244_2.00
Homo sapiens
NHRAYBYAATCAN
NTGATTRVRTYDN
SELEX
Jolma et al.(2013)
DUXA_1
0.818
0.798
DUXA
M05402_2.00
Homo sapiens
TRAYBYAATCA
TGATTRVRTYA
SELEX
Yin et al.(2017)
DUXA_eDBD_HT-SELEX
0.818
0.798
DUXA
M10756_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DUXA_02
0.818
0.798
DUXA
M05403_2.00
Homo sapiens
YRAYBYAATCA
TGATTRVRTYR
SELEX
Yin et al.(2017)
DUXA_eDBD_Methyl-HT-SELEX
0.818
0.798
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000013465
Homeodomain
16
72
RRSRTKFTEEQLKILVDAFNKKPYPGYAIKQRLALEVNTEESRIQIWFQNRRARHRF
ENSTTRP00000013465
Homeodomain
99
155
RRCRTSYTSSQLQTLMNAFMENPYPGIDSRQQLAEDIGVPESRVQIWFQNRRSRLRI
Links
Other
Homeodomain
family TFs
Other
Tursiops truncatus
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC194965.4_FG004
Zea mays
AC194965.4_FG004
N
BGIOSGA018779
Oryza indica
BGIOSGA018779
N
BRADI2G12590
Brachypodium distachyon
BRADI2G12590
N
OB05G13650
Oryza brachyantha
OB05G13650
N
OBART01G14380
Oryza barthii
OBART01G14380
N
OBART05G03900
Oryza barthii
OBART05G03900
N
OLONG_020882
Oryza longistaminata
OLONG_020882
N
OPUNC05G03600
Oryza punctata
OPUNC05G03600
N
ORGLA05G0036200
Oryza glaberrima
ORGLA05G0036200
N
ORUFI01G16060
Oryza rufipogon
ORUFI01G16060
N
OS05G0155400
Oryza sativa
OS05G0155400
N
Sb09g004315
Sorghum bicolor
Sb09g004315
N
Si011269m.g
Setaria italica
Si011269m.g
N
Pavir.J31164
Panicum virgatum
Pavir.J31164
N