ENSXMAG00000000423 (Xiphophorus maculatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSXMAG00000000423 T217095_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.722 0.435
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.722 0.435
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.722 0.435
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.722 0.435
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.722 0.435
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.722 0.435
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.722 0.435
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.722 0.435
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.722 0.435
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.685 0.522
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.685 0.522
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.685 0.522
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000000416 Homeodomain 168 213

Links

Other Homeodomain family TFs
Other Xiphophorus maculatus TFs

1235 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC050 Arabidopsis thaliana AT3G10480 D 0.000
Bostr.22252s0012 Boechera stricta Bostr.22252s0012 I 0.000
Cagra.0834s0028 Capsella grandiflora Cagra.0834s0028 I 0.000
Bostr.22252s0011 Boechera stricta Bostr.22252s0011 I 0.000
mgf000623m Mimulus guttatus mgf000623m I 0.000
cassava22912.valid.m1 Manihot esculenta cassava22912.valid.m1 I 0.000
VIT_13s0019g05240 Vitis vinifera VIT_13s0019g05240 I 0.000
TRIUR3_33524 Triticum urartu TRIUR3_33524 I 0.000
Traes_7DS_9FBF54244 Triticum aestivum Traes_7DS_9FBF54244 I 0.000
Traes_7BL_FB5FAC1E8 Triticum aestivum Traes_7BL_FB5FAC1E8 I 0.000
Traes_6AL_8BA1FF8B2 Triticum aestivum Traes_6AL_8BA1FF8B2 I 0.000
TCM_043357 Theobroma cacao TCM_043357 I 0.000
Solyc05g055470.2 Solanum lycopersicum Solyc05g055470.2 I 0.000
Si016620m.g Setaria italica Si016620m.g I 0.000
Si013361m.g Setaria italica Si013361m.g I 0.000
Sb07g023900 Sorghum bicolor Sb07g023900 I 0.000
POPTR_0010s23630 Populus trichocarpa POPTR_0010s23630 I 0.000
PGSC0003DMG402023373 Solanum tuberosum PGSC0003DMG402023373 I 0.000
Lus10038670.g Linum usitatissimum Lus10038670.g I 0.000
Thhalv10020745m.g Eutrema salsugineum Thhalv10020745m.g I 0.000
Thhalv10020717m.g Eutrema salsugineum Thhalv10020717m.g I 0.000
SapurV1A.0213s0310 Salix purpurea SapurV1A.0213s0310 I 0.000
Pavir.Fb02407 Panicum virgatum Pavir.Fb02407 I 0.000
Pavir.Fa00048 Panicum virgatum Pavir.Fa00048 I 0.000
Pavir.Ab03009 Panicum virgatum Pavir.Ab03009 I 0.000
Pavir.Aa00085 Panicum virgatum Pavir.Aa00085 I 0.000
orange1.1g014130m.g Citrus sinensis orange1.1g014130m.g I 0.000
OS08G0562200 Oryza sativa OS08G0562200 I 0.000
Lus10037939.g Linum usitatissimum Lus10037939.g I 0.000
Gorai.012G007000 Gossypium raimondii Gorai.012G007000 I 0.000
Gorai.009G309300 Gossypium raimondii Gorai.009G309300 I 0.000
Ciclev10031606m.g Citrus clementina Ciclev10031606m.g I 0.000
Carubv10013694m.g Capsella rubella Carubv10013694m.g I 0.000
Carubv10013564m.g Capsella rubella Carubv10013564m.g I 0.000
Cagra.0834s0029 Capsella grandiflora Cagra.0834s0029 I 0.000
OB02G44540 Oryza brachyantha OB02G44540 I 0.000
ANAC052 Arabidopsis thaliana AT3G10490 I 0.000
BGIOSGA009316 Oryza indica BGIOSGA009316 I 0.000
BGIOSGA026481 Oryza indica BGIOSGA026481 I 0.000
Bo1g143840 Brassica oleracea Bo1g143840 I 0.000
Bo1g143850 Brassica oleracea Bo1g143850 I 0.000
Bra034118 Brassica rapa Bra034118 I 0.000
Bra034119 Brassica rapa Bra034119 I 0.000
BRADI3G12470 Brachypodium distachyon BRADI3G12470 I 0.000
BRADI3G56080 Brachypodium distachyon BRADI3G56080 I 0.000
F775_27564 Aegilops tauschii F775_27564 I 0.000
ANAC050 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000864 I 0.000
ANAC052 Arabidopsis lyrata fgenesh2_kg.3__1083__AT3G10490.2 I 0.000
GRMZM2G113950 Zea mays GRMZM2G113950 I 0.000
GRMZM2G125777 Zea mays GRMZM2G125777 I 0.000
LPERR08G20450 Leersia perrieri LPERR08G20450 I 0.000
OMERI08G18580 Oryza meridionalis OMERI08G18580 I 0.000
ORUFI08G26250 Oryza rufipogon ORUFI08G26250 I 0.000
ORUFI02G39260 Oryza rufipogon ORUFI02G39260 I 0.000
ORGLA08G0191600 Oryza glaberrima ORGLA08G0191600 I 0.000
ORGLA02G0329400 Oryza glaberrima ORGLA02G0329400 I 0.000
OPUNC08G21700 Oryza punctata OPUNC08G21700 I 0.000
OPUNC02G34910 Oryza punctata OPUNC02G34910 I 0.000
ONIVA08G26810 Oryza nivara ONIVA08G26810 I 0.000
ONIVA02G40500 Oryza nivara ONIVA02G40500 I 0.000
OS02G0822400 Oryza sativa OS02G0822400 I 0.000
OLONG_023179 Oryza longistaminata OLONG_023179 I 0.000
OGLUM08G25240 Oryza glumaepatula OGLUM08G25240 I 0.000
OGLUM02G38880 Oryza glumaepatula OGLUM02G38880 I 0.000
OBART08G23760 Oryza barthii OBART08G23760 I 0.000
OBART02G37700 Oryza barthii OBART02G37700 I 0.000
OB08G30590 Oryza brachyantha OB08G30590 I 0.000
LPERR02G31180 Leersia perrieri LPERR02G31180 N 0.000