GH13518 (Drosophila grimshawi)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 FBgn0120994 T217763_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.761 0.532
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.761 0.532
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.761 0.532
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.761 0.532
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.761 0.532
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.761 0.532
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.761 0.532
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.761 0.532
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.761 0.532
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.675 0.404
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.675 0.404
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.675 0.404
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0147424 Homeodomain 202 248

Links

Other Homeodomain family TFs
Other Drosophila grimshawi TFs

1183 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scro Drosophila melanogaster FBgn0028993 D 0.000
LCUP013886 Lucilia cuprina LCUP013886 I 0.000
Obox7 Mus musculus ENSMUSG00000055942 I 0.000
NECAME_06897 Necator americanus NECAME_06897 N 0.000
SCUD_0001462201 Schistosoma curassoni SCUD_0001462201 N 0.000
SCUD_0001375201 Schistosoma curassoni SCUD_0001375201 N 0.000
scaffold28-EXSNAP2012.55 Pristionchus exspectatus scaffold28-EXSNAP2012.55 N 0.000
SBAD_0000181501 Soboliphyme baturini SBAD_0000181501 N 0.000
PXEA_0002877701 Protopolystoma xenopodis PXEA_0002877701 N 0.000
PXEA_0001780701 Protopolystoma xenopodis PXEA_0001780701 N 0.000
PXEA_0000454701 Protopolystoma xenopodis PXEA_0000454701 N 0.000
SMTD_0000532701 Schistosoma mattheei SMTD_0000532701 N 0.000
MhA1_Contig1584.frz3.gene20 Meloidogyne hapla MhA1_Contig1584.frz3.gene20 N 0.000
MhA1_Contig1149.frz3.gene7 Meloidogyne hapla MhA1_Contig1149.frz3.gene7 N 0.000
L892_g18619 Steinernema scapterisci L892_g18619 N 0.000
HDID_0000158701 Hymenolepis diminuta HDID_0000158701 N 0.000
DILT_0000804401 Diphyllobothrium latum DILT_0000804401 N 0.000
SMRZ_0000101501 Schistosoma margrebowiei SMRZ_0000101501 N 0.000
CGOC_0001416801 Cylicostephanus goldi CGOC_0001416801 N 0.000
SMTD_0001176901 Schistosoma mattheei SMTD_0001176901 N 0.000
SMTD_0001311201 Schistosoma mattheei SMTD_0001311201 N 0.000
SPER_0000113901 Spirometra erinaceieuropaei SPER_0000113901 N 0.000
SPER_0000756001 Spirometra erinaceieuropaei SPER_0000756001 N 0.000
SROB_0000847001 Schistosoma rodhaini SROB_0000847001 N 0.000
SROB_0001175701 Schistosoma rodhaini SROB_0001175701 N 0.000
T265_03375 Opisthorchis viverrini T265_03375 N 0.000
TASK_0001026901 Taenia asiatica TASK_0001026901 N 0.000
TRE_0001513201 Trichobilharzia regenti TRE_0001513201 N 0.000
TsM_000433500 Taenia solium TsM_000433500 N 0.000
TsM_000683500 Taenia solium TsM_000683500 N 0.000
TsM_001091900 Taenia solium TsM_001091900 N 0.000
CLEC007188 Cimex lectularius CLEC007188 N 0.000
BGIBMGA000762 Bombyx mori BGIBMGA000762 N 0.000
EFV59996 Trichinella spiralis EFV59996 N 0.000
EFV60006 Trichinella spiralis EFV60006 N 0.000
GD19379 Drosophila simulans FBgn0085026 N 0.000
ISCW011755 Ixodes scapularis ISCW011755 N 0.000
PHUM317730 Pediculus humanus PHUM317730 N 0.000
Ppa-ceh-28 Pristionchus pacificus PPA19627 N 0.000
SINV24463 Solenopsis invicta SINV24463 N 0.000
Smp_030050 Schistosoma mansoni Smp_030050 N 0.000
YQE_02582 Dendroctonus ponderosae YQE_02582 N 0.000
Cflo_11771--XP_392872.2_APIME Camponotus floridanus Cflo_11771--XP_392872.2_APIME N 0.000
Hsal_00498--XP_394578.2_APIME Harpegnathos saltator Hsal_00498--XP_394578.2_APIME N 0.000
Ogr05812 Ophisaurus gracilis Ogr05812 N 0.000
D915_09342 Fasciola hepatica D915_09342 N 0.000
LDEC004800 Leptinotarsa decemlineata LDEC004800 N 0.000
Sjc_0057900 Schistosoma japonicum Sjc_0057900 N 0.000
SMU15032406 Schmidtea mediterranea SMU15032406 N 0.000
AALB003620 Anopheles albimanus AALB003620 N 0.000
AATE015248 Anopheles atroparvus AATE015248 N 0.000
AFAF019448 Anopheles farauti AFAF019448 N 0.000
AMEM018396 Anopheles merus AMEM018396 N 0.000
ASTEI04298 Anopheles stephensi ASTEI04298 N 0.000
BGLB001559 Biomphalaria glabrata BGLB001559 N 0.000
ANCCEY_11186 Ancylostoma ceylanicum ANCCEY_11186 N 0.000
ANCDUO_22746 Ancylostoma duodenale ANCDUO_22746 N 0.000
ACEP14712 Atta cephalotes ACEP14712 N 0.000
csin104516 Clonorchis sinensis csin104516 N 0.000