CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Obox7
(
Mus musculus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSMUSG00000055942
T212546_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Obox5
M00527_2.00
Mus musculus
NTWATHNN
NNDATWAN
PBM
Berger et al.(2008)
Obox5_2284
0.670
0.860
Obox5
M00528_2.00
Mus musculus
NWDATHNN
NNDATHWN
PBM
Berger et al.(2008)
Obox5_3963
0.670
0.860
Q8VHG7_MOUSE
M00529_2.00
Mus musculus
WTAATCCH
DGGATTAW
PBM
Berger et al.(2008)
Obox2_3438
0.669
0.807
Obox3
M00523_2.00
Mus musculus
NWWATMN
NKATWWN
PBM
Berger et al.(2008)
Obox3_3439
0.669
0.825
Obox1
M00515_2.00
Mus musculus
NTAATCYNNN
NNNRGATTAN
PBM
Berger et al.(2008)
Obox1_3970
0.659
0.807
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000069239
Homeodomain
95
151
RKERIVYSKEQQRLLQKHFDECQYPKEKKIVELAVLIGVTKMEIKKWFKNNRAKYRQ
ENSMUSP00000138871
Homeodomain
95
137
RKERIVYSKEQQRLLQKHFDECQYPKEKKIVELAVLIGVTKME
ENSMUSP00000138932
Homeodomain
95
151
RKERIVYSKEQQRLLQKHFDECQYPKEKKIVELAVLIGVTKMEIKKWFKNNRAKYRQ
Links
Other
Homeodomain
family TFs
Other
Mus musculus
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EFV59996
Trichinella spiralis
EFV59996
N
0.717
EFV60006
Trichinella spiralis
EFV60006
N
0.717
SBAD_0000181501
Soboliphyme baturini
SBAD_0000181501
N
0.717
Smp_030050
Schistosoma mansoni
Smp_030050
N
0.702
PXEA_0002877701
Protopolystoma xenopodis
PXEA_0002877701
N
0.695
csin104516
Clonorchis sinensis
csin104516
N
0.676
SROB_0001175701
Schistosoma rodhaini
SROB_0001175701
N
0.674
BGLB001559
Biomphalaria glabrata
BGLB001559
N
0.673
Obox5
Mus musculus
ENSMUSG00000074366
D
0.670
GD19379
Drosophila simulans
FBgn0085026
N
0.670
Obox3
Mus musculus
ENSMUSG00000066772
D
0.669
Q8VHG7_MOUSE
Mus musculus
ENSMUSG00000074369
D
0.669
PHUM317730
Pediculus humanus
PHUM317730
N
0.669
DILT_0000804401
Diphyllobothrium latum
DILT_0000804401
N
0.667
SPER_0000113901
Spirometra erinaceieuropaei
SPER_0000113901
N
0.667
SPER_0000700401
Spirometra erinaceieuropaei
SPER_0000700401
N
0.667
PXEA_0001780701
Protopolystoma xenopodis
PXEA_0001780701
N
0.663
Obox1
Mus musculus
ENSMUSG00000054310
D
0.659
D915_09342
Fasciola hepatica
D915_09342
N
0.656
SMRZ_0000101501
Schistosoma margrebowiei
SMRZ_0000101501
N
0.651
SMTD_0000532701
Schistosoma mattheei
SMTD_0000532701
N
0.651
TRE_0001513201
Trichobilharzia regenti
TRE_0001513201
N
0.651
TsM_000683500
Taenia solium
TsM_000683500
N
0.650
T265_03375
Opisthorchis viverrini
T265_03375
N
0.643
SMU15032406
Schmidtea mediterranea
SMU15032406
N
0.642
HDID_0000158701
Hymenolepis diminuta
HDID_0000158701
N
0.636
MhA1_Contig1584.frz3.gene20
Meloidogyne hapla
MhA1_Contig1584.frz3.gene20
N
0.634
SMTD_0001311201
Schistosoma mattheei
SMTD_0001311201
N
0.632
SINV19440
Solenopsis invicta
SINV19440
N
0.628
TsM_001091900
Taenia solium
TsM_001091900
N
0.626
SCUD_0001375201
Schistosoma curassoni
SCUD_0001375201
N
0.617
SPER_0000756001
Spirometra erinaceieuropaei
SPER_0000756001
N
0.615
ENSTSYG00000000237
Tarsius syrichta
ENSTSYG00000000237
N
0.608
TsM_000433500
Taenia solium
TsM_000433500
N
0.606
SROB_0000847001
Schistosoma rodhaini
SROB_0000847001
N
0.604
MhA1_Contig864.frz3.gene5
Meloidogyne hapla
MhA1_Contig864.frz3.gene5
N
0.603