GH19480 (Drosophila grimshawi)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 FBgn0126945 T217801_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bcd
M03779_2.00 		Drosophila melanogaster
NNNTAATCCNN
NNGGATTANNN		 SELEX
Nitta et al.(2015)
bcd_1 		0.867 1.000
bcd
M05872_2.00 		Drosophila melanogaster
HTAATCY
RGATTAD		 SMiLE-seq
Isakova et al.(2017)
Bcd 		0.867 1.000
bcd
M06480_2.00 		Drosophila melanogaster
TAATCC
GGATTA		 B1H
Mathelier et al.(2014)
MA0212.1 		0.867 1.000
bcd
M06219_2.00 		Drosophila melanogaster
BNTAATCC
GGATTANV		 B1H
Zhu et al.(2011)
Bcd_Cell_FBgn0000166 		0.867 1.000
bcd
M06220_2.00 		Drosophila melanogaster
HTAAKCYB
VRGMTTAD		 B1H
Zhu et al.(2011)
bcd_FlyReg_FBgn0000166 		0.867 1.000
bcd
M06221_2.00 		Drosophila melanogaster
YWAAKCY
RGMTTWR		 B1H
Zhu et al.(2011)
bcd_NAR_FBgn0000166 		0.867 1.000
bcd
M06222_2.00 		Drosophila melanogaster
BTAATCY
RGATTAV		 B1H
Zhu et al.(2011)
Bcd_SOLEXA_FBgn0000166 		0.867 1.000
bcd
M09673_2.00 		Drosophila melanogaster
YTAAKCY
RGMTTAR		 Misc
Kulakovskiy et al.(2009)
bcd 		0.867 1.000
bcd
M10782_2.00 		Drosophila melanogaster
HTAATCYS
SRGATTAD		 Transfac
Matys et al.(2006)
I$BCD_01 		0.867 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0153386 Homeodomain 87 143

Links

Other Homeodomain family TFs
Other Drosophila grimshawi TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG18054 Caenorhabditis briggsae CBG18054 D
atf-7 Caenorhabditis elegans WBGene00000223 D
L889_g21188 Steinernema feltiae L889_g21188 I
TELCIR_01729 Teladorsagia circumcincta TELCIR_01729 I
L892_g20441 Steinernema scapterisci L892_g20441 I
L898_g34193 Steinernema monticolum L898_g34193 I
MhA1_Contig342.frz3.gene59 Meloidogyne hapla MhA1_Contig342.frz3.gene59 I
nAv.1.0.1.g05180 Acanthocheilonema viteae nAv.1.0.1.g05180 I
NBR_0000389301 Nippostrongylus brasiliensis NBR_0000389301 I
nDi.2.2.2.g07084 Dirofilaria immitis nDi.2.2.2.g07084 I
NECAME_10658 Necator americanus NECAME_10658 I
nLs.2.1.2.g00491 Litomosoides sigmodontis nLs.2.1.2.g00491 I
nOo.2.0.1.g05937 Onchocerca ochengi nOo.2.0.1.g05937 I
OESDEN_14093 Oesophagostomum dentatum OESDEN_14093 I
OFLC_0000863501 Onchocerca flexuosa OFLC_0000863501 I
PEQ_0000753901 Parascaris equorum PEQ_0000753901 I
PTRK_0000099300 Parastrongyloides trichosuri PTRK_0000099300 I
RSKR_0000227000 Rhabditophanes kr3021 RSKR_0000227000 I
scaffold12-EXSNAP2012.55 Pristionchus exspectatus scaffold12-EXSNAP2012.55 I
SMUV_0000975301 Syphacia muris SMUV_0000975301 I
SPAL_0001020300 Strongyloides papillosus SPAL_0001020300 I
SSTP_0000122600 Strongyloides stercoralis SSTP_0000122600 I
SVE_0504300 Strongyloides venezuelensis SVE_0504300 I
SVUK_0000294201 Strongylus vulgaris SVUK_0000294201 I
TCLT_0000921801 Thelazia callipaeda TCLT_0000921801 I
TCNE_0001734401 Toxocara canis TCNE_0001734401 I
Bm2053 Brugia malayi Bm2053 I
ASU_05203 Ascaris suum ASU_05203 I
CBN12281 Caenorhabditis brenneri CBN12281 I
CJA14314 Caenorhabditis japonica CJA14314 I
CRE20256 Caenorhabditis remanei CRE20256 I
LOAG_06720 Loa loa LOAG_06720 I
Ppa-atf-7 Pristionchus pacificus PPA19791 I
WBGene00244485 Onchocerca volvulus WBGene00244485 I
ACAC_0001181901 Angiostrongylus cantonensis ACAC_0001181901 I
ANCCAN_09146 Ancylostoma caninum ANCCAN_09146 I
ANCCEY_04780 Ancylostoma ceylanicum ANCCEY_04780 I
ANCDUO_04423 Ancylostoma duodenale ANCDUO_04423 I
ASIM_0001340801 Anisakis simplex ASIM_0001340801 I
L596_g6797 Steinernema carpocapsae L596_g6797 I
augustus_masked-nMf.1.1.scaf16754-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf16754-processed-gene-0.0 I
BTMF_0001510901 Brugia timori BTMF_0001510901 I
BXY_1618500 Bursaphelenchus xylophilus BXY_1618500 I
CGOC_0000243701 Cylicostephanus goldi CGOC_0000243701 I
DME_0000565001 Dracunculus medinensis DME_0000565001 I
EEL_0000209901 Elaeophora elaphi EEL_0000209901 I
EVEC_0000278301 Enterobius vermicularis EVEC_0000278301 I
Hba_12020 Heterorhabditis bacteriophora Hba_12020 I
HCOI00036200 Haemonchus contortus HCOI00036200 I
HPBE_0000018301 Heligmosomoides bakeri HPBE_0000018301 I
HPLM_0000438501 Haemonchus placei HPLM_0000438501 I