HB-1 (Arabidopsis lyrata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 fgenesh2_kg.1__3015__AT1G28420.1 T218450_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.862 0.965
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__3015__AT1G28420.1 Homeodomain 41 97

Links

Other Homeodomain family TFs
Other Arabidopsis lyrata TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF260 Homo sapiens ENSG00000254004 D 0.000
ENSCJAG00000009456 Callithrix jacchus ENSCJAG00000009456 I 0.000
ENSCSAG00000018531 Chlorocebus sabaeus ENSCSAG00000018531 I 0.000
ZNF260 Myotis lucifugus ENSMLUG00000017080 I 0.000
ENSMMUG00000018555 Macaca mulatta ENSMMUG00000018555 I 0.000
ENSMPUG00000018917 Mustela putorius furo ENSMPUG00000018917 I 0.000
Zfp260 Mus musculus ENSMUSG00000049421 I 0.000
ENSNLEG00000003057 Nomascus leucogenys ENSNLEG00000003057 I 0.000
ZNF260 Oryctolagus cuniculus ENSOCUG00000029144 I 0.000
ZNF260 Ochotona princeps ENSOPRG00000000328 I 0.000
ENSPANG00000013548 Papio anubis ENSPANG00000013548 I 0.000
ENSPPYG00000009903 Pongo abelii ENSPPYG00000009903 I 0.000
ZNF260 Pan troglodytes ENSPTRG00000039009 I 0.000
ZNF260 Pteropus vampyrus ENSPVAG00000006898 I 0.000
ZNF260 Sus scrofa ENSSSCG00000002930 I 0.000
ENSMMUP00000024408 Macaca fascicularis ENSMMUP00000024408 I 0.000