MTR_2g038625 (Medicago truncatula)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 MTR_2g038625 T220786_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT2
M06929_2.00 		Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT2_colamp_a 		0.750 0.696
HAT2
M06930_2.00 		Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW		 Dap-seq
OMalley et al.(2016)
HAT2_col_v31 		0.750 0.696
HAT1
M02047_2.00 		Arabidopsis thaliana
NMATGATTRN
NYAATCATKN		 PBM
Weirauch et al.(2014)
pTH8107 		0.749 0.679
HAT1
M06922_2.00 		Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT1_col_a 		0.749 0.679
HAT1
M06923_2.00 		Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN		 Dap-seq
OMalley et al.(2016)
HAT1_colamp_a 		0.749 0.679
ATHB-X
M06902_2.00 		Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD		 Dap-seq
OMalley et al.(2016)
ATHB18_col_a 		0.747 0.625
ATHB-X
M06903_2.00 		Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN		 Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a 		0.747 0.625
HAT22
M06926_2.00 		Arabidopsis thaliana
NNYAATCATT
AATGATTRNN		 Dap-seq
OMalley et al.(2016)
HAT22_col_a 		0.746 0.696
HAT3
M00728_2.00 		Arabidopsis thaliana
DTGATTRV
BYAATCAH		 PBM
Chang et al.(2013)
pTH7400 		0.701 0.679
ATHB-4
M01065_2.00 		Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN		 PBM
Sullivan et al.(2014)
pTH8184 		0.701 0.661
ATHB-4
M02042_2.00 		Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN		 PBM
Weirauch et al.(2014)
pTH8667 		0.701 0.661
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH37459 Homeodomain 81 136

Links

Other Homeodomain family TFs
Other Medicago truncatula TFs

692 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Y75B8A.6 Caenorhabditis elegans WBGene00013543 D 0.000
nOo.2.0.1.g00486 Onchocerca ochengi nOo.2.0.1.g00486 I 0.000
L596_g2693 Steinernema carpocapsae L596_g2693 I 0.000
L889_g11692 Steinernema feltiae L889_g11692 I 0.000
L892_g8723 Steinernema scapterisci L892_g8723 I 0.000
L893_g11169 Steinernema glaseri L893_g11169 I 0.000
L898_g2249 Steinernema monticolum L898_g2249 I 0.000
maker-nMf.1.1.scaf00003-augustus-gene-0.28 Meloidogyne floridensis maker-nMf.1.1.scaf00003-augustus-gene-0.28 I 0.000
MhA1_Contig45.frz3.gene23 Meloidogyne hapla MhA1_Contig45.frz3.gene23 I 0.000
nAv.1.0.1.g08193 Acanthocheilonema viteae nAv.1.0.1.g08193 I 0.000
nDi.2.2.2.g00651 Dirofilaria immitis nDi.2.2.2.g00651 I 0.000
NECAME_17957 Necator americanus NECAME_17957 I 0.000
nLs.2.1.2.g02012 Litomosoides sigmodontis nLs.2.1.2.g02012 I 0.000
HPLM_0000711501 Haemonchus placei HPLM_0000711501 I 0.000
RSKR_0000225500 Rhabditophanes kr3021 RSKR_0000225500 I 0.000
scaffold299-EXSNAP2012.1 Pristionchus exspectatus scaffold299-EXSNAP2012.1 I 0.000
SMUV_0000924801 Syphacia muris SMUV_0000924801 I 0.000
SPAL_0001350300 Strongyloides papillosus SPAL_0001350300 I 0.000
SSTP_0000713800 Strongyloides stercoralis SSTP_0000713800 I 0.000
SVE_1815200 Strongyloides venezuelensis SVE_1815200 I 0.000
TCLT_0000655501 Thelazia callipaeda TCLT_0000655501 I 0.000
TELCIR_14928 Teladorsagia circumcincta TELCIR_14928 I 0.000
TELCIR_18811 Teladorsagia circumcincta TELCIR_18811 I 0.000
ANCDUO_18427 Ancylostoma duodenale ANCDUO_18427 I 0.000
Bm7134 Brugia malayi Bm7134 I 0.000
CBN05533 Caenorhabditis brenneri CBN05533 I 0.000
CRE24477 Caenorhabditis remanei CRE24477 I 0.000
LOAG_00893 Loa loa LOAG_00893 I 0.000
WBGene00245177 Onchocerca volvulus WBGene00245177 I 0.000
Minc01117 Meloidogyne incognita Minc01117 I 0.000
ACAC_0000147901 Angiostrongylus cantonensis ACAC_0000147901 I 0.000
ACOC_0000995801 Angiostrongylus costaricensis ACOC_0000995801 I 0.000
ANCCAN_26375 Ancylostoma caninum ANCCAN_26375 I 0.000
ANCCEY_00898 Ancylostoma ceylanicum ANCCEY_00898 I 0.000
WUBG_12123 Wuchereria bancrofti WUBG_12123 I 0.000
ASIM_0002143001 Anisakis simplex ASIM_0002143001 I 0.000
ASU_09163 Ascaris suum ASU_09163 I 0.000
BXY_0595700 Bursaphelenchus xylophilus BXY_0595700 I 0.000
DICVIV_03386 Dictyocaulus viviparus DICVIV_03386 I 0.000
EEL_0000525201 Elaeophora elaphi EEL_0000525201 I 0.000
EVEC_0001194701 Enterobius vermicularis EVEC_0001194701 I 0.000
GPLIN_001307100 Globodera pallida GPLIN_001307100 I 0.000
HCOI01068300 Haemonchus contortus HCOI01068300 I 0.000
HCOI02160700 Haemonchus contortus HCOI02160700 I 0.000