CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TELCIR_18811
(
Teladorsagia circumcincta
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02008 (zf-CXXC)
IPR002857
TELCIR_18811
T168846_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Y75B8A.6
M00652_2.00
Caenorhabditis elegans
NHKCGGD
HCCGMDN
PBM
Narasimhan et al.(2015)
pTH10798
0.806
0.806
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TELCIR_18811
CxxC
1
39
CGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRC
TELCIR_18811
CxxC
53
85
TFKARVGCNQCEDCRMPDCQICLAQKRAYDQGA
Links
Other
CxxC
family TFs
Other
Teladorsagia circumcincta
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0002143001
Anisakis simplex
ASIM_0002143001
I
0.833
BTMF_0001264901
Brugia timori
BTMF_0001264901
I
0.833
EEL_0000525201
Elaeophora elaphi
EEL_0000525201
I
0.833
OFLC_0000081601
Onchocerca flexuosa
OFLC_0000081601
I
0.833
TELCIR_14928
Teladorsagia circumcincta
TELCIR_14928
I
0.833
nLs.2.1.2.g02012
Litomosoides sigmodontis
nLs.2.1.2.g02012
I
0.819
TCLT_0000655501
Thelazia callipaeda
TCLT_0000655501
I
0.819
CBN05533
Caenorhabditis brenneri
CBN05533
I
0.806
CRE24477
Caenorhabditis remanei
CRE24477
I
0.806
Y75B8A.6
Caenorhabditis elegans
WBGene00013543
D
0.806
L596_g2693
Steinernema carpocapsae
L596_g2693
I
0.806
L889_g11692
Steinernema feltiae
L889_g11692
I
0.806
L892_g8723
Steinernema scapterisci
L892_g8723
I
0.806
L893_g11169
Steinernema glaseri
L893_g11169
I
0.806
L898_g2249
Steinernema monticolum
L898_g2249
I
0.806
BXY_0595700
Bursaphelenchus xylophilus
BXY_0595700
I
0.792
scaffold299-EXSNAP2012.1
Pristionchus exspectatus
scaffold299-EXSNAP2012.1
I
0.792
Minc01117
Meloidogyne incognita
Minc01117
I
0.778
maker-nMf.1.1.scaf00003-augustus-gene-0.28
Meloidogyne floridensis
maker-nMf.1.1.scaf00003-augustus-gene-0.28
I
0.778
MhA1_Contig45.frz3.gene23
Meloidogyne hapla
MhA1_Contig45.frz3.gene23
I
0.778
RSKR_0000225500
Rhabditophanes kr3021
RSKR_0000225500
I
0.764
PTRK_0000092500
Parastrongyloides trichosuri
PTRK_0000092500
I
0.736
SSTP_0000713800
Strongyloides stercoralis
SSTP_0000713800
I
0.736
SVE_1815200
Strongyloides venezuelensis
SVE_1815200
I
0.736
ANCDUO_18427
Ancylostoma duodenale
ANCDUO_18427
I
0.714