MTR_7g103340 (Medicago truncatula)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 MTR_7g103340 T220854_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-51
M00867_2.00 		Arabidopsis thaliana
ATWATKNN
NNMATWAT		 PBM
Franco-Zorrilla et al.(2014)
ATHB51 		0.670 0.825
ATHB-51
M06927_2.00 		Arabidopsis thaliana
DNCAATAATTGAD
HTCAATTATTGNH		 Dap-seq
OMalley et al.(2016)
LMI1_col_a 		0.670 0.825
ATHB-51
M06928_2.00 		Arabidopsis thaliana
NDNCAATAATTGA
TCAATTATTGNHN		 Dap-seq
OMalley et al.(2016)
LMI1_colamp_a 		0.670 0.825
PK20392.1
M01250_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11331 		0.645 0.649
PK20392.1
M01251_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11332 		0.645 0.649
ATHB-22
M02041_2.00 		Arabidopsis thaliana
NNATAATWWWNNN
NNNWWWATTATNN		 PBM
Weirauch et al.(2014)
pTH5883 		0.636 0.684
ATHB-20
M06912_2.00 		Arabidopsis thaliana
HYAATAATTRD
HYAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_col_a 		0.625 0.632
ATHB-20
M06913_2.00 		Arabidopsis thaliana
HYAATMATTRD
HYAATKATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a 		0.625 0.632
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH24094 Homeodomain 61 117

Links

Other Homeodomain family TFs
Other Medicago truncatula TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cers3.L Xenopus laevis XB-GENE-6251639 N
SINV24013 Solenopsis invicta SINV24013 N
Afo_R008528 Aptenodytes forsteri Afo_R008528 N
Alligator_sinensis_CCG000180.1 Alligator sinensis Alligator_sinensis_CCG000180.1 N
Cflo_01607--XP_001123059.1_APIME Camponotus floridanus Cflo_01607--XP_001123059.1_APIME N
Hsal_14209--XP_001123059.1_APIME Harpegnathos saltator Hsal_14209--XP_001123059.1_APIME N
Ogr04694 Ophisaurus gracilis Ogr04694 N
CLEC001936 Cimex lectularius CLEC001936 N
HHAL005214-PA Halyomorpha halys HHAL005214-PA N
LDEC003623 Leptinotarsa decemlineata LDEC003623 N
RPRC008736 Rhodnius prolixus RPRC008736 N
AALB003420 Anopheles albimanus AALB003420 N
AARA002212 Anopheles arabiensis AARA002212 N
ACHR009221 Anopheles christyi ACHR009221 N
AEPI009380 Anopheles epiroticus AEPI009380 N
AFAF012002 Anopheles farauti AFAF012002 N
AMEC017514 Anopheles melas AMEC017514 N
AMEM008456 Anopheles merus AMEM008456 N
AQUA000629 Anopheles quadriannulatus AQUA000629 N
ENSSHAG00000001747 Sarcophilus harrisii ENSSHAG00000001747 N
AAEL009092 Aedes aegypti AAEL009092 N
ACYPI008958 Acyrthosiphon pisum ACYPI008958 N
ADAC010420 Anopheles darlingi ADAC010420 N
AGAP001761 Anopheles gambiae AGAP001761 N
CPIJ012963 Culex quinquefasciatus CPIJ012963 N
ENSLOCG00000004390 Lepisosteus oculatus ENSLOCG00000004390 N
ENSMICG00000014767 Microcebus murinus ENSMICG00000014767 N
ENSMICG00000017321 Microcebus murinus ENSMICG00000017321 N
CpipJ_CPIJ012963 Culex pipiens CpipJ_CPIJ012963 N
CERS5 Takifugu rubripes ENSTRUG00000010435 N
HelroG82517 Helobdella robusta HelroG82517 N
HMEL006147 Heliconius melpomene HMEL006147 N
KGM_15429 Danaus plexippus KGM_15429 N
KGM_16996 Danaus plexippus KGM_16996 N
L798_00373 Zootermopsis nevadensis L798_00373 N
MCINX005366 Melitaea cinxia MCINX005366 N
MCINX005367 Melitaea cinxia MCINX005367 N