ORUFI03G06390 (Oryza rufipogon)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ORUFI03G06390 T221907_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_gwp_gw1.C_70211
M02220_2.00 		Physcomitrella patens
HMATNANDNN
NNHNTNATKD		 PBM
Weirauch et al.(2014)
pTH8489 		0.845 0.768
ATHB-13
M06900_2.00 		Arabidopsis thaliana
HYAATAATTDD
HHAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB13_col_a 		0.822 0.696
ATHB-13
M06901_2.00 		Arabidopsis thaliana
NYAATAATTRW
WYAATTATTRN		 Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a 		0.822 0.696
HAT5
M06914_2.00 		Arabidopsis thaliana
NHAATAATTDW
WHAATTATTDN		 Dap-seq
OMalley et al.(2016)
HAT5_col_a 		0.812 0.750
HAT5
M06915_2.00 		Arabidopsis thaliana
WNYAATAATTRWDN
NHWYAATTATTRNW		 Dap-seq
OMalley et al.(2016)
HAT5_colamp_a 		0.812 0.750
HAT5
M02683_2.00 		Arabidopsis thaliana
SCAATAATTNNV
BNNAATTATTGS		 SELEX
Mathelier et al.(2014)
MA0008.2 		0.812 0.750
HAT5
M10624_2.00 		Arabidopsis thaliana
YSCAATAATTNNVN
NBNNAATTATTGSR		 Transfac
Matys et al.(2006)
P$ATHB1_01 		0.812 0.750
ATHB-6
M02040_2.00 		Arabidopsis thaliana
HATNATTDN
NHAATNATD		 PBM
Weirauch et al.(2014)
pTH7670 		0.808 0.714
ATHB-16
M02050_2.00 		Arabidopsis thaliana
YAATMATT
AATKATTR		 PBM
Weirauch et al.(2014)
pTH7270 		0.808 0.714
ATHB-6
M06909_2.00 		Arabidopsis thaliana
NNNHATKATTR
YAATMATDNNN		 Dap-seq
OMalley et al.(2016)
ATHB6_col_a 		0.808 0.714
ATHB-6
M06910_2.00 		Arabidopsis thaliana
NCAATAATTRN
NYAATTATTGN		 Dap-seq
OMalley et al.(2016)
ATHB6_colamp_a 		0.808 0.714
ATHB-5
M06932_2.00 		Arabidopsis thaliana
NYAATMATTND
HNAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_col_a 		0.790 0.732
ATHB-5
M06933_2.00 		Arabidopsis thaliana
NYAATMATTN
NAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a 		0.790 0.732
ATHB-5
M02684_2.00 		Arabidopsis thaliana
CAATVATTGVVSV
BSBBCAATBATTG		 SELEX
Mathelier et al.(2014)
MA0110.2 		0.790 0.732
ATHB-5
M10630_2.00 		Arabidopsis thaliana
CAATVATTG
CAATBATTG		 Transfac
Matys et al.(2006)
P$ATHB5_01 		0.790 0.732
ATHB-53
M06934_2.00 		Arabidopsis thaliana
HMAATAATTRD
HYAATTATTKD		 Dap-seq
OMalley et al.(2016)
ATHB53_col_a 		0.754 0.625
ATHB-53
M06935_2.00 		Arabidopsis thaliana
NNWHCAATWATTDDN
NHHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB53_colamp_a 		0.754 0.625
ATHB-21
M06907_2.00 		Arabidopsis thaliana
NNWHCAATWATTDN
NHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB21_col_a 		0.751 0.661
ATHB-21
M06908_2.00 		Arabidopsis thaliana
WWDDNNNHAATWATTGDTNN
NNAHCAATWATTDNNNHHWW		 Dap-seq
OMalley et al.(2016)
ATHB21_colamp_a 		0.751 0.661
HB-5
M06924_2.00 		Arabidopsis thaliana
NNAHCAATWATTKDNNNHWWH
DWWDNNNHMAATWATTGDTNN		 Dap-seq
OMalley et al.(2016)
ATHB40_col_a 		0.749 0.625
HB-5
M06925_2.00 		Arabidopsis thaliana
HHAATWATTGDWNN
NNWHCAATWATTDD		 Dap-seq
OMalley et al.(2016)
ATHB40_colamp_a 		0.749 0.625
PK20392.1
M01250_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11331 		0.687 0.714
PK20392.1
M01251_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11332 		0.687 0.714
ATHB-20
M06912_2.00 		Arabidopsis thaliana
HYAATAATTRD
HYAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_col_a 		0.667 0.696
ATHB-20
M06913_2.00 		Arabidopsis thaliana
HYAATMATTRD
HYAATKATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a 		0.667 0.696
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI03G06390.1 Homeodomain 71 126

Links

Other Homeodomain family TFs
Other Oryza rufipogon TFs

802 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
hbx10 Dictyostelium discoideum DDB_G0284293 D 0.000
phx1 Schizosaccharomyces pombe SPAC32A11.03c D 0.000
kal-1 Neurospora crassa NCU03593 D 0.000
CIMG_09071 Coccidioides immitis CIMG_09071 I 0.000
MCYG_05206 Microsporum canis MCYG_05206 I 0.000
SNOG_16027 Stagonospora nodorum SNOG_16027 I 0.000
SPPG_03702 Spizellomyces punctatus SPPG_03702 I 0.000
VDBG_06534 Verticillium albo atrum VDBG_06534 I 0.000
A1O1_09257 Capronia coronata A1O1_09257 I 0.000
A1O3_04716 Capronia epimyces A1O3_04716 I 0.000
A1O5_11654 Cladophialophora psammophila A1O5_11654 I 0.000
A1O7_09038 Cladophialophora yegresii A1O7_09038 I 0.000
A1O9_10475 Exophiala aquamarina A1O9_10475 I 0.000
ACRE_078430 Acremonium chrysogenum ACRE_078430 I 0.000
ARB_04330 Arthroderma benhamiae ARB_04330 I 0.000
AUEXF2481DRAFT_4723 Aureobasidium subglaciale AUEXF2481DRAFT_4723 I 0.000
BAUCODRAFT_46155 Baudoinia compniacensis BAUCODRAFT_46155 I 0.000
BBA_09764 Beauveria bassiana BBA_09764 I 0.000
Bcin08g06620 Botrytis cinerea Bcin08g06620 I 0.000
BDDG_01924 Blastomyces dermatitidis BDDG_01924 I 0.000
BGHDH14_bgh05455 Blumeria graminis BGHDH14_bgh05455 I 0.000
BOTBODRAFT_273374 Botryobasidium botryosum BOTBODRAFT_273374 I 0.000
ACLA_049440 Aspergillus clavatus CADACLAG00004607 I 0.000
CADAFLAG00002000 Aspergillus flavus CADAFLAG00002000 I 0.000
AFUA_4G10220 Aspergillus fumigatus CADAFUAG00008139 I 0.000
CADANGAG00004383 Aspergillus niger CADANGAG00004383 I 0.000
ANIA_02009 Aspergillus nidulans CADANIAG00008677 I 0.000
CADAORAG00001740 Aspergillus oryzae CADAORAG00001740 I 0.000
ATEG_00707 Aspergillus terreus CADATEAG00006049 I 0.000
NFIA_105830 Neosartorya fischeri CADNFIAG00009642 I 0.000
CC1G_12380 Coprinopsis cinerea CC1G_12380 I 0.000
CCM_01917 Cordyceps militaris CCM_01917 I 0.000
CFIO01_08636 Colletotrichum fioriniae CFIO01_08636 I 0.000
CGGC5_8911 Colletotrichum gloeosporioides CGGC5_8911 I 0.000
CH063_09099 Colletotrichum higginsianum CH063_09099 I 0.000
CHGG_07578 Chaetomium globosum CHGG_07578 I 0.000
CMQ_7465 Grosmannia clavigera CMQ_7465 I 0.000
Cob_09008 Colletotrichum orbiculare Cob_09008 I 0.000
COCC4DRAFT_145536 Bipolaris maydis COCC4DRAFT_145536 I 0.000
COCCADRAFT_98536 Bipolaris zeicola COCCADRAFT_98536 I 0.000
COCMIDRAFT_97398 Bipolaris oryzae COCMIDRAFT_97398 I 0.000
COCSADRAFT_316172 Bipolaris sorokiniana COCSADRAFT_316172 I 0.000
COCVIDRAFT_35595 Bipolaris victoriae COCVIDRAFT_35595 I 0.000
CPC735_015080 Coccidioides posadasii CPC735_015080 I 0.000
CPUR_02900 Claviceps purpurea CPUR_02900 I 0.000
CSUB01_05911 Colletotrichum sublineola CSUB01_05911 I 0.000
CTHT_0069620 Chaetomium thermophilum CTHT_0069620 I 0.000
CY34DRAFT_634996 Suillus luteus CY34DRAFT_634996 I 0.000
DOTSEDRAFT_69441 Dothistroma septosporum DOTSEDRAFT_69441 I 0.000
DRE_02305 Drechslerella stenobrocha DRE_02305 I 0.000
EPUS_00532 Endocarpon pusillum EPUS_00532 I 0.000
EURHEDRAFT_33024 Aspergillus ruber EURHEDRAFT_33024 I 0.000
EV44_g5529 Erysiphe necator EV44_g5529 I 0.000
F503_08379 Ophiostoma piceae uamh F503_08379 I 0.000
FFUJ_08943 Fusarium fujikuroi FFUJ_08943 I 0.000
FGRRES_09019 Fusarium graminearum FGRRES_09019 I 0.000
FIBRA_06885 Fibroporia radiculosa FIBRA_06885 I 0.000
FOMPIDRAFT_1135811 Fomitopsis pinicola FOMPIDRAFT_1135811 I 0.000
FPSE_07078 Fusarium pseudograminearum FPSE_07078 I 0.000
G647_07996 Cladophialophora carrionii G647_07996 I 0.000
GALMADRAFT_67940 Galerina marginata GALMADRAFT_67940 I 0.000
GGTG_14272 Gaeumannomyces graminis GGTG_14272 I 0.000
GLOTRDRAFT_62830 Gloeophyllum trabeum GLOTRDRAFT_62830 I 0.000
GLRG_04843 Colletotrichum graminicola GLRG_04843 I 0.000
GMDG_01699 Pseudogymnoascus destructans GMDG_01699 I 0.000
H072_3561 Dactylellina haptotyla H072_3561 I 0.000
H101_04135 Trichophyton interdigitale H101_04135 I 0.000
H102_02623 Trichophyton rubrum H102_02623 I 0.000
H105_02641 Trichophyton soudanense H105_02641 I 0.000
HCBG_07805 Histoplasma capsulatum HCBG_07805 I 0.000
HETIRDRAFT_316855 Heterobasidion irregulare HETIRDRAFT_316855 I 0.000
HMPREF1120_01387 Exophiala dermatitidis HMPREF1120_01387 I 0.000
HMPREF1541_09773 Cyphellophora europaea HMPREF1541_09773 I 0.000
HMPREF1624_02616 Sporothrix schenckii HMPREF1624_02616 I 0.000
JAAARDRAFT_435587 Jaapia argillacea JAAARDRAFT_435587 I 0.000
K443DRAFT_118259 Laccaria amethystina K443DRAFT_118259 I 0.000
LACBIDRAFT_297319 Laccaria bicolor LACBIDRAFT_297319 I 0.000
LEMA_P109350.1 Leptosphaeria maculans LEMA_P109350.1 I 0.000
M404DRAFT_929271 Pisolithus tinctorius M404DRAFT_929271 I 0.000
M437DRAFT_17573 Aureobasidium melanogenum M437DRAFT_17573 I 0.000
M438DRAFT_337107 Aureobasidium pullulans M438DRAFT_337107 I 0.000
M7I_3672 Glarea lozoyensis M7I_3672 I 0.000
MAC_07310 Metarhizium acridum MAC_07310 I 0.000
MAJ_09430 Metarhizium majus MAJ_09430 I 0.000
MAM_07140 Metarhizium album MAM_07140 I 0.000
MANI_005260 Metarhizium anisopliae MANI_005260 I 0.000
MAPG_09605 Magnaporthe poae MAPG_09605 I 0.000
MBM_01133 Marssonina brunnea MBM_01133 I 0.000
MBR_09861 Metarhizium brunneum MBR_09861 I 0.000
MCYG_05206 Arthroderma otae MCYG_05206 I 0.000
MGG_04853 Magnaporthe oryzae MGG_04853 I 0.000
MGU_07058 Metarhizium guizhouense MGU_07058 I 0.000
MGYG_06249 Microsporum gypseum MGYG_06249 I 0.000
MPH_05440 Macrophomina phaseolina MPH_05440 I 0.000
MYCFIDRAFT_108409 Pseudocercospora fijiensis MYCFIDRAFT_108409 I 0.000
Mycgr3G68153 Zymoseptoria tritici Mycgr3G68153 I 0.000
MYCTH_2301643 Myceliophthora thermophila MYCTH_2301643 I 0.000
NechaG46180 Fusarium solani NechaG46180 I 0.000
NEUTE1DRAFT_116070 Neurospora tetrasperma NEUTE1DRAFT_116070 I 0.000
OCS_03121 Ophiocordyceps sinensis OCS_03121 I 0.000
OIDMADRAFT_115588 Oidiodendron maius OIDMADRAFT_115588 I 0.000
PAAG_08226 Paracoccidioides sp lutzii PAAG_08226 I 0.000
PABG_03432 Paracoccidioides brasiliensis PABG_03432 I 0.000
PAXRUDRAFT_210495 Paxillus rubicundulus PAXRUDRAFT_210495 I 0.000
PCH_Pc22g12610 Penicillium rubens PCH_Pc22g12610 I 0.000
PDE_03945 Penicillium oxalicum PDE_03945 I 0.000
PDIP_25010 Penicillium digitatum PDIP_25010 I 0.000
PEX1_092370 Penicillium expansum PEX1_092370 I 0.000
PFICI_09611 Pestalotiopsis fici PFICI_09611 I 0.000
PHLGIDRAFT_100262 Phlebiopsis gigantea PHLGIDRAFT_100262 I 0.000
PILCRDRAFT_6622 Piloderma croceum PILCRDRAFT_6622 I 0.000
PISMIDRAFT_97497 Pisolithus microcarpus PISMIDRAFT_97497 I 0.000
PITC_045370 Penicillium italicum PITC_045370 I 0.000
PLEOSDRAFT_1011447 Pleurotus ostreatus PLEOSDRAFT_1011447 I 0.000
PLICRDRAFT_366051 Plicaturopsis crispa PLICRDRAFT_366051 I 0.000
PMAA_096690 Talaromyces marneffei PMAA_096690 I 0.000
PODANS_2_6460 Podospora anserina PODANS_2_6460 I 0.000
POSPLDRAFT_91424 Postia placenta POSPLDRAFT_91424 I 0.000
POSPLDRAFT_96600 Postia placenta POSPLDRAFT_96600 I 0.000
PTRG_06001 Pyrenophora triticirepentis PTRG_06001 I 0.000
PTT_08847 Pyrenophora teres PTT_08847 I 0.000
PV04_09430 Capronia semiimmersa PV04_09430 I 0.000
PV05_00128 Exophiala xenobiotica PV05_00128 I 0.000
PV06_08621 Exophiala oligosperma PV06_08621 I 0.000
PV07_00358 Cladophialophora immunda PV07_00358 I 0.000
PV08_02081 Exophiala spinifera PV08_02081 I 0.000
PV09_05176 Verruconis gallopava PV09_05176 I 0.000
PV10_04527 Exophiala mesophila PV10_04527 I 0.000
PV11_03368 Exophiala sideris PV11_03368 I 0.000
PVAR5_4295 Byssochlamys spectabilis PVAR5_4295 I 0.000
S40285_02237 Stachybotrys chlorohalonata S40285_02237 I 0.000
S40288_03762 Stachybotrys chartarum S40288_03762 I 0.000
SAPIO_CDS8330 Scedosporium apiospermum SAPIO_CDS8330 I 0.000
SBOR_4438 Sclerotinia borealis SBOR_4438 I 0.000
SCLCIDRAFT_793812 Scleroderma citrinum SCLCIDRAFT_793812 I 0.000
SEPMUDRAFT_147420 Sphaerulina musiva SEPMUDRAFT_147420 I 0.000
SERLA73DRAFT_90145 Serpula lacrymans SERLA73DRAFT_90145 I 0.000
SETTUDRAFT_88112 Setosphaeria turcica SETTUDRAFT_88112 I 0.000
SMAC_03124 Sordaria macrospora SMAC_03124 I 0.000
SNOG_16027 Phaeosphaeria nodorum SNOG_16027 I 0.000
SOCG_04229 Schizosaccharomyces octosporus SOCG_04229 I 0.000
SPBR_02439 Sporothrix brasiliensis SPBR_02439 I 0.000
SPOG_00312 Schizosaccharomyces cryophilus SPOG_00312 I 0.000
TEQG_04675 Trichophyton equinum TEQG_04675 I 0.000
TESG_03886 Trichophyton tonsurans TESG_03886 I 0.000
THITE_70031 Thielavia terrestris THITE_70031 I 0.000
TRIATDRAFT_229262 Trichoderma atroviride TRIATDRAFT_229262 I 0.000
TRIREDRAFT_77154 Trichoderma reesei TRIREDRAFT_77154 I 0.000
TRIVIDRAFT_36050 Trichoderma virens TRIVIDRAFT_36050 I 0.000
TRV_05560 Trichophyton verrucosum TRV_05560 I 0.000
TSTA_044650 Talaromyces stipitatus TSTA_044650 I 0.000
U727_00430330251 Penicillium solitum U727_00430330251 I 0.000
UCREL1_10957 Eutypa lata UCREL1_10957 I 0.000
UCRNP2_645 Neofusicoccum parvum UCRNP2_645 I 0.000
UCRPA7_6974 Togninia minima UCRPA7_6974 I 0.000
UREG_03315 Uncinocarpus reesii UREG_03315 I 0.000
UV8b_1861 Ustilaginoidea virens UV8b_1861 I 0.000
V499_08137 Pseudogymnoascus pannorum V499_08137 I 0.000
V565_069290 Rhizoctonia solani V565_069290 I 0.000
VDAG_05070 Verticillium dahliae VDAG_05070 I 0.000
VDBG_06534 Verticillium alfalfae VDBG_06534 I 0.000
VHEMI08470 Torrubiella hemipterigena VHEMI08470 I 0.000
W97_08853 Coniosporium apollinis W97_08853 I 0.000
X797_009738 Metarhizium robertsii X797_009738 I 0.000
YALI0_A18469g Yarrowia lipolytica YALI0_A18469g I 0.000
Z517_01632 Fonsecaea pedrosoi Z517_01632 I 0.000
Z518_03392 Rhinocladiella mackenziei Z518_03392 I 0.000
Z519_08645 Cladophialophora bantiana Z519_08645 I 0.000
e_gw1.17.43.1 Nectria haematococca e_gw1.17.43.1 I 0.000
estExt_fgenesh2_pg.C_10368 Neurospora discreta estExt_fgenesh2_pg.C_10368 I 0.000
estExt_Genewise1.C_230428 Cochliobolus heterostrophus C5 estExt_Genewise1.C_230428 I 0.000
estExt_Genewise1Plus.C_20760 Mycosphaerella fijiensis estExt_Genewise1Plus.C_20760 I 0.000
estExt_Genewise1Plus.C_chr_20819 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_20819 I 0.000
fgenesh1_pg.C_scaffold_7000173 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_7000173 I 0.000
GID1.0049906 Dictyostelium purpureum GID1.0049906 I 0.000
EFA78939.1 Polysphondylium pallidum EFA78939.1 I 0.000
AB10510.1 Alternaria brassicicola AB10510.1 I 0.000
estExt_fgenesh1_pm.C_11052 Cryphonectria parasitica estExt_fgenesh1_pm.C_11052 I 0.000
Pc22g12610 Penicillium chrysogenum Pc22g12610 I 0.000
PMAA_096690 Penicillium marneffei PMAA_096690 I 0.000