CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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phx1
(
Schizosaccharomyces pombe
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
SPAC32A11.03c
T223640_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
phx1
M02173_2.00
Schizosaccharomyces pombe
NWTTAATTANN
NNTAATTAAWN
PBM
Weirauch et al.(2014)
pTH6047
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
kal-1
M02225_2.00
Neurospora crassa
NNNNRHNN
NNDYNNNN
PBM
Weirauch et al.(2014)
pTH8911
0.614
0.582
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02173_2.00
Homeodomain
1
55
KKQRLTADQLAYLLREFSKDTNPPPAIREKIGRELNIPERSVTIWFQNRRAKSKL
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPAC32A11.03c.1
Homeodomain
169
223
KKQRLTADQLAYLLREFSKDTNPPPAIREKIGRELNIPERSVTIWFQNRRAKSKL
Links
Other
Homeodomain
family TFs
Other
Schizosaccharomyces pombe
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SOCG_04229
Schizosaccharomyces octosporus
SOCG_04229
I
0.754
SPOG_00312
Schizosaccharomyces cryophilus
SPOG_00312
I
0.754
VHEMI08470
Torrubiella hemipterigena
VHEMI08470
I
0.618
BBA_09764
Beauveria bassiana
BBA_09764
I
0.615
GMDG_01699
Pseudogymnoascus destructans
GMDG_01699
I
0.615
V499_08137
Pseudogymnoascus pannorum
V499_08137
I
0.615
AOL_s00054g426
Arthrobotrys oligospora
AOL_s00054g426
I
0.614
CCM_01917
Cordyceps militaris
CCM_01917
I
0.614
CFIO01_08636
Colletotrichum fioriniae
CFIO01_08636
I
0.614
CGGC5_8911
Colletotrichum gloeosporioides
CGGC5_8911
I
0.614
CH063_09099
Colletotrichum higginsianum
CH063_09099
I
0.614
Cob_09008
Colletotrichum orbiculare
Cob_09008
I
0.614
CPUR_02900
Claviceps purpurea
CPUR_02900
I
0.614
CSUB01_05911
Colletotrichum sublineola
CSUB01_05911
I
0.614
DRE_02305
Drechslerella stenobrocha
DRE_02305
I
0.614
GGTG_14272
Gaeumannomyces graminis
GGTG_14272
I
0.614
GLRG_04843
Colletotrichum graminicola
GLRG_04843
I
0.614
H072_3561
Dactylellina haptotyla
H072_3561
I
0.614
MAC_07310
Metarhizium acridum
MAC_07310
I
0.614
MAJ_09430
Metarhizium majus
MAJ_09430
I
0.614
MAM_07140
Metarhizium album
MAM_07140
I
0.614
MANI_005260
Metarhizium anisopliae
MANI_005260
I
0.614
MAPG_09605
Magnaporthe poae
MAPG_09605
I
0.614
MBR_09861
Metarhizium brunneum
MBR_09861
I
0.614
MGG_04853
Magnaporthe oryzae
MGG_04853
I
0.614
MGU_07058
Metarhizium guizhouense
MGU_07058
I
0.614
NechaG46180
Fusarium solani
NechaG46180
I
0.614
NEUTE1DRAFT_116070
Neurospora tetrasperma
NEUTE1DRAFT_116070
I
0.614
OCS_03121
Ophiocordyceps sinensis
OCS_03121
I
0.614
PFICI_09611
Pestalotiopsis fici
PFICI_09611
I
0.614
S40285_02237
Stachybotrys chlorohalonata
S40285_02237
I
0.614
S40288_03762
Stachybotrys chartarum
S40288_03762
I
0.614
SMAC_03124
Sordaria macrospora
SMAC_03124
I
0.614
UCREL1_10957
Eutypa lata
UCREL1_10957
I
0.614
UCRPA7_6974
Togninia minima
UCRPA7_6974
I
0.614
X797_009738
Metarhizium robertsii
X797_009738
I
0.614
e_gw1.17.43.1
Nectria haematococca
e_gw1.17.43.1
I
0.614
estExt_fgenesh2_pg.C_10368
Neurospora discreta
estExt_fgenesh2_pg.C_10368
I
0.614
kal-1
Neurospora crassa
NCU03593
D
0.614
VDAG_05070
Verticillium dahliae
VDAG_05070
I
0.612
FFUJ_08943
Fusarium fujikuroi
FFUJ_08943
I
0.609
FGRRES_09019
Fusarium graminearum
FGRRES_09019
I
0.609
FPSE_07078
Fusarium pseudograminearum
FPSE_07078
I
0.609
BGHDH14_bgh05455
Blumeria graminis
BGHDH14_bgh05455
I
0.602
CMQ_7465
Grosmannia clavigera
CMQ_7465
I
0.602
EV44_g5529
Erysiphe necator
EV44_g5529
I
0.602
F503_08379
Ophiostoma piceae uamh
F503_08379
I
0.602
HMPREF1624_02616
Sporothrix schenckii
HMPREF1624_02616
I
0.602
M7I_3672
Glarea lozoyensis
M7I_3672
I
0.602
MBM_01133
Marssonina brunnea
MBM_01133
I
0.602
OIDMADRAFT_115588
Oidiodendron maius
OIDMADRAFT_115588
I
0.602
SBOR_4438
Sclerotinia borealis
SBOR_4438
I
0.602
SPBR_02439
Sporothrix brasiliensis
SPBR_02439
I
0.602
Bcin08g06620
Botrytis cinerea
Bcin08g06620
I
0.600
Smp_175710
Schistosoma mansoni
Smp_175710
I
0.600