HOX17 (Oryza sativa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OS04G0548700 T222012_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT2
M06929_2.00 		Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT2_colamp_a 		0.827 0.772
HAT2
M06930_2.00 		Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW		 Dap-seq
OMalley et al.(2016)
HAT2_col_v31 		0.827 0.772
HAT22
M06926_2.00 		Arabidopsis thaliana
NNYAATCATT
AATGATTRNN		 Dap-seq
OMalley et al.(2016)
HAT22_col_a 		0.823 0.772
HAT1
M02047_2.00 		Arabidopsis thaliana
NMATGATTRN
NYAATCATKN		 PBM
Weirauch et al.(2014)
pTH8107 		0.797 0.807
HAT1
M06922_2.00 		Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT1_col_a 		0.797 0.807
HAT1
M06923_2.00 		Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN		 Dap-seq
OMalley et al.(2016)
HAT1_colamp_a 		0.797 0.807
ATHB-4
M01065_2.00 		Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN		 PBM
Sullivan et al.(2014)
pTH8184 		0.792 0.789
ATHB-4
M02042_2.00 		Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN		 PBM
Weirauch et al.(2014)
pTH8667 		0.792 0.789
HAT3
M00728_2.00 		Arabidopsis thaliana
DTGATTRV
BYAATCAH		 PBM
Chang et al.(2013)
pTH7400 		0.792 0.772
ATHB-X
M06902_2.00 		Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD		 Dap-seq
OMalley et al.(2016)
ATHB18_col_a 		0.773 0.649
ATHB-X
M06903_2.00 		Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN		 Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a 		0.773 0.649
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS04T0548700-01 Homeodomain 80 136

Links

Other Homeodomain family TFs
Other Oryza sativa TFs

694 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
pax6.L Xenopus laevis XB-GENE-865046 I
MDOA004921 Musca domestica MDOA004921 N
SSLN_0001114201 Schistocephalus solidus SSLN_0001114201 N
SPER_0003607601 Spirometra erinaceieuropaei SPER_0003607601 N
SPER_0001686401 Spirometra erinaceieuropaei SPER_0001686401 N
SPER_0000032601 Spirometra erinaceieuropaei SPER_0000032601 N
PXEA_0002437401 Protopolystoma xenopodis PXEA_0002437401 N
PXEA_0001865101 Protopolystoma xenopodis PXEA_0001865101 N
PEQ_0000595901 Parascaris equorum PEQ_0000595901 N
PEQ_0000587201 Parascaris equorum PEQ_0000587201 N
ECPE_0000273401 Echinostoma caproni ECPE_0000273401 N
DILT_0001312701 Diphyllobothrium latum DILT_0001312701 N
D918_03763 Trichuris suis D918_03763 N
ACEP15315 Atta cephalotes ACEP15315 N
ASIS006297 Anopheles sinensis ASIS006297 N
AQUA004623 Anopheles quadriannulatus AQUA004623 N
AEPI000661 Anopheles epiroticus AEPI000661 N
ADIR004612 Anopheles dirus ADIR004612 N
ACHR007556 Anopheles christyi ACHR007556 N
fgenesh1_kg.C_scaffold_16000108 Phytophthora capsici fgenesh1_kg.C_scaffold_16000108 N
SMU15026520 Schmidtea mediterranea SMU15026520 N
Sjc_0082940 Schistosoma japonicum Sjc_0082940 N
LOAG_09072 Loa loa LOAG_09072 N
GK24890 Drosophila willistoni FBgn0226849 N
CRE03357 Caenorhabditis remanei CRE03357 N