CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb03g030770
(
Sorghum bicolor
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
Sb03g030770
T222969_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RLT1
M02038_2.00
Arabidopsis thaliana
NDHTCWWN
NWWGADHN
PBM
Weirauch et al.(2014)
pTH5432
0.646
0.737
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb03g030770.1
Homeodomain
55
111
PVKRMMKTPYQLEVLEKTYAAEQYPSEAMRLELSAKIGLSDRQLQMWFCHRRLKDRK
Links
Other
Homeodomain
family TFs
Other
Sorghum bicolor
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M437DRAFT_86849
Aureobasidium melanogenum
M437DRAFT_86849
I
0.000
NechaG53569
Fusarium solani
NechaG53569
N
0.000
PCH_Pc21g04750
Penicillium rubens
PCH_Pc21g04750
N
0.000
Pc21g04750
Penicillium chrysogenum
Pc21g04750
N
0.000