CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SELMODRAFT_422900
(
Selaginella moellendorffii
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
SELMODRAFT_422900
T223103_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RLT1
M02038_2.00
Arabidopsis thaliana
NDHTCWWN
NWWGADHN
PBM
Weirauch et al.(2014)
pTH5432
0.649
0.702
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ15125
Homeodomain
5
61
HPKRKMKTPSQLEILERVYAEDKYPSEIVRSELSHQLNLTDRQVKMWFCHRRLKDRK
Links
Other
Homeodomain
family TFs
Other
Selaginella moellendorffii
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCHCODRAFT_256250
Schizophyllum commune
SCHCODRAFT_256250
D
0.000
CC1G_02850
Coprinopsis cinerea
CC1G_02850
I
0.000
CY34DRAFT_800861
Suillus luteus
CY34DRAFT_800861
I
0.000
GALMADRAFT_256609
Galerina marginata
GALMADRAFT_256609
I
0.000
Moror_14813
Moniliophthora roreri
Moror_14813
I
0.000
HYDPIDRAFT_170170
Hydnomerulius pinastri
HYDPIDRAFT_170170
N
0.000
JAAARDRAFT_39670
Jaapia argillacea
JAAARDRAFT_39670
N
0.000
K443DRAFT_131005
Laccaria amethystina
K443DRAFT_131005
N
0.000
LACBIDRAFT_313151
Laccaria bicolor
LACBIDRAFT_313151
N
0.000
M404DRAFT_150968
Pisolithus tinctorius
M404DRAFT_150968
N
0.000
M404DRAFT_16752
Pisolithus tinctorius
M404DRAFT_16752
N
0.000
PAXINDRAFT_155919
Paxillus involutus
PAXINDRAFT_155919
N
0.000
PAXRUDRAFT_830306
Paxillus rubicundulus
PAXRUDRAFT_830306
N
0.000
PISMIDRAFT_29985
Pisolithus microcarpus
PISMIDRAFT_29985
N
0.000
SCLCIDRAFT_98318
Scleroderma citrinum
SCLCIDRAFT_98318
N
0.000