CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SELMODRAFT_447089
(
Selaginella moellendorffii
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
SELMODRAFT_447089
T223110_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RLT1
M02038_2.00
Arabidopsis thaliana
NDHTCWWN
NWWGADHN
PBM
Weirauch et al.(2014)
pTH5432
0.661
0.754
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ11318
Homeodomain
18
74
NTKRKMKTPSQLEILERVYAEDKYPSEVVRAELSTKLSLTDRQLQMWFCHRRLKDRK
Links
Other
Homeodomain
family TFs
Other
Selaginella moellendorffii
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CapteG228212
Capitella teleta
CapteG228212
N
0.000
CGI_10007146
Crassostrea gigas
CGI_10007146
N
0.000
LotgiG135618
Lottia gigantea
LotgiG135618
N
0.000
SPU_017172
Strongylocentrotus purpuratus
SPU_017172
N
0.000
e_gw.84.219.1
Branchiostoma floridae
e_gw.84.219.1
N
0.000
estExt_gwp.C_830005
Branchiostoma floridae
estExt_gwp.C_830005
N
0.000
Ocbimv22034128m.g
Octopus bimaculoides
Ocbimv22034128m.g
N
0.000