Solyc07g008730.1 (Solanum lycopersicum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Solyc07g008730.1 T223597_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MTR_2g038000
M02141_2.00 		Medicago truncatula
NDNYWNNNNN
NNNNNWRNHN		 PBM
Weirauch et al.(2014)
pTH6339 		0.621 0.614
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc07g008730.1.1 Homeodomain 483 539

Links

Other Homeodomain family TFs
Other Solanum lycopersicum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
tfap2b Danio rerio ENSDARG00000012667 I 0.000
ENSGACG00000002672 Gasterosteus aculeatus ENSGACG00000002672 I 0.000
ENSGMOG00000009513 Gadus morhua ENSGMOG00000009513 I 0.000
TFAP2D Microcebus murinus ENSMICG00000005507 I 0.000
PEQ_0000626601 Parascaris equorum PEQ_0000626601 I 0.000
ANCCEY_07283 Ancylostoma ceylanicum ANCCEY_07283 I 0.000
D917_08051 Trichinella nativa D917_08051 I 0.000
MhA1_Contig1235.frz3.gene9 Meloidogyne hapla MhA1_Contig1235.frz3.gene9 I 0.000
genemark-nMf.1.1.scaf12791-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf12791-processed-gene-0.1 I 0.000
GPLIN_001548200 Globodera pallida GPLIN_001548200 I 0.000
BTMF_0000874201 Brugia timori BTMF_0000874201 N 0.000
TCLT_0000876801 Thelazia callipaeda TCLT_0000876801 N 0.000
nLs.2.1.2.g01550 Litomosoides sigmodontis nLs.2.1.2.g01550 N 0.000
nDi.2.2.2.g01985 Dirofilaria immitis nDi.2.2.2.g01985 N 0.000
nAv.1.0.1.g04089 Acanthocheilonema viteae nAv.1.0.1.g04089 N 0.000
EEL_0000939001 Elaeophora elaphi EEL_0000939001 N 0.000
WUBG_08246 Wuchereria bancrofti WUBG_08246 N 0.000
ASIM_0000382801 Anisakis simplex ASIM_0000382801 N 0.000
WBGene00237271 Onchocerca volvulus WBGene00237271 N 0.000
LOAG_02576 Loa loa LOAG_02576 N 0.000
Bm12958 Brugia malayi Bm12958 N 0.000