CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g04089
(
Acanthocheilonema viteae
)
AP-2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03299 (TF_AP-2)
IPR013854
nAv.1.0.1.g04089
T011465_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t04089-RA
AP-2
234
437
ETFCAVPGRTSLLSSTTKYHVTIGEVYRRISPPECLNASLLGGILRKAKSKDGGKTLRDSLKRVGLTLPAGRRKAATVTAWTALVEEEALQMAKDFAALSEKAFPVRQIAEFICNRMIWQDNPRECCTFIEHTRLFIKELLGIVNGEYSGIMFGNQSNLNSLTAPTMQYGLAHFSLLTHGFGPLAFVAVFDTLISMLDEMLKCY
Links
Other
AP-2
family TFs
Other
Acanthocheilonema viteae
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPUH_0002219901
Gongylonema pulchrum
GPUH_0002219901
I
0.944
EEL_0000939001
Elaeophora elaphi
EEL_0000939001
N
0.897
LOAG_02576
Loa loa
LOAG_02576
N
0.887
nDi.2.2.2.g01985
Dirofilaria immitis
nDi.2.2.2.g01985
N
0.882
BTMF_0000874201
Brugia timori
BTMF_0000874201
N
0.882
Bm12958
Brugia malayi
Bm12958
N
0.882
nOo.2.0.1.g04969
Onchocerca ochengi
nOo.2.0.1.g04969
N
0.870
WUBG_08246
Wuchereria bancrofti
WUBG_08246
N
0.867
ANCCEY_07283
Ancylostoma ceylanicum
ANCCEY_07283
I
0.864
WBGene00237271
Onchocerca volvulus
WBGene00237271
N
0.851
nLs.2.1.2.g01550
Litomosoides sigmodontis
nLs.2.1.2.g01550
N
0.851
ASIM_0000382801
Anisakis simplex
ASIM_0000382801
N
0.832
GPLIN_001548200
Globodera pallida
GPLIN_001548200
I
0.825
tfap2b
Danio rerio
ENSDARG00000012667
I
0.818
ENSGACG00000002672
Gasterosteus aculeatus
ENSGACG00000002672
I
0.818
ENSGMOG00000009513
Gadus morhua
ENSGMOG00000009513
I
0.818
MhA1_Contig1235.frz3.gene9
Meloidogyne hapla
MhA1_Contig1235.frz3.gene9
I
0.802
genemark-nMf.1.1.scaf12791-processed-gene-0.1
Meloidogyne floridensis
genemark-nMf.1.1.scaf12791-processed-gene-0.1
I
0.802
ENSSARG00000001996
Sorex araneus
ENSSARG00000001996
I
0.795
TCLT_0000876801
Thelazia callipaeda
TCLT_0000876801
N
0.790
nOo.2.0.1.g09186
Onchocerca ochengi
nOo.2.0.1.g09186
I
0.774
TFAP2D
Microcebus murinus
ENSMICG00000005507
I
0.762
D917_08051
Trichinella nativa
D917_08051
I
0.744
PEQ_0000626601
Parascaris equorum
PEQ_0000626601
I
0.720
ECPE_0000534101
Echinostoma caproni
ECPE_0000534101
I
0.716
ENSMEUG00000007703
Macropus eugenii
ENSMEUG00000007703
I
0.714
snap_masked-nMf.1.1.scaf31395-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf31395-processed-gene-0.2
I
0.714
MCINX002204
Melitaea cinxia
MCINX002204
I
0.700