Ca_16386 (Cicer arietinum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ca_16386 T225458_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.867 0.965
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.867 0.965
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.867 0.965
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.839 0.825
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.839 0.825
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.806 0.772
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.790 0.754
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.790 0.754
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.786 0.772
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.786 0.772
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.786 0.772
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.786 0.772
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.786 0.772
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.786 0.772
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.769 0.632
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_16386 Homeodomain 117 173

Links

Other Homeodomain family TFs
Other Cicer arietinum TFs

617 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M17_MAIZE Zea mays M17_MAIZE D
FBP24_PETHY Petunia x hybrida FBP24_PETHY D
Q9ATE9_PETHY Petunia x hybrida Q9ATE9_PETHY D
AMTR_s00001p00270400 Amborella trichopoda AMTR_s00001p00270400 I
AMTR_s00002p00262770 Amborella trichopoda AMTR_s00002p00262770 I
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I
BGIOSGA007056 Oryza indica BGIOSGA007056 I
BGIOSGA015023 Oryza indica BGIOSGA015023 I
Bo2g160980 Brassica oleracea Bo2g160980 I
Bo7g097810 Brassica oleracea Bo7g097810 I
Bo7g098190 Brassica oleracea Bo7g098190 I
Bo9g014270 Brassica oleracea Bo9g014270 I
Bra012997 Brassica rapa Bra012997 I
Bra013028 Brassica rapa Bra013028 I
Bra026507 Brassica rapa Bra026507 I
Bra029365 Brassica rapa Bra029365 I
BRADI3G05260 Brachypodium distachyon BRADI3G05260 I
F775_30836 Aegilops tauschii F775_30836 I
GLYMA01G02525 Glycine max GLYMA01G02525 I
GLYMA09G27461 Glycine max GLYMA09G27461 I
GLYMA09G33451 Glycine max GLYMA09G33451 I
GLYMA09G42061 Glycine max GLYMA09G42061 I
GLYMA10G38580 Glycine max GLYMA10G38580 I
GLYMA16G32540 Glycine max GLYMA16G32540 I
GLYMA20G00401 Glycine max GLYMA20G00401 I
GLYMA20G29250 Glycine max GLYMA20G29250 I
GRMZM2G130382 Zea mays GRMZM2G130382 I
GSMUA_Achr2G02660_001 Musa acuminata GSMUA_Achr2G02660_001 I
GSMUA_Achr3G23580_001 Musa acuminata GSMUA_Achr3G23580_001 I
LPERR02G04610 Leersia perrieri LPERR02G04610 I
MLOC_65966 Hordeum vulgare MLOC_65966 I
MTR_1g038300 Medicago truncatula MTR_1g038300 I
MTR_4g036050 Medicago truncatula MTR_4g036050 I
MTR_5g031000 Medicago truncatula MTR_5g031000 I
MTR_5g032150 Medicago truncatula MTR_5g032150 I
MTR_5g032520 Medicago truncatula MTR_5g032520 I
OB02G14670 Oryza brachyantha OB02G14670 I
OBART02G05380 Oryza barthii OBART02G05380 I
OGLUM02G05240 Oryza glumaepatula OGLUM02G05240 I
OMERI02G06250 Oryza meridionalis OMERI02G06250 I
ONIVA02G05710 Oryza nivara ONIVA02G05710 I
OPUNC02G04560 Oryza punctata OPUNC02G04560 I
OPUNC09G14150 Oryza punctata OPUNC09G14150 I
ORGLA02G0049700 Oryza glaberrima ORGLA02G0049700 I
ORUFI02G05500 Oryza rufipogon ORUFI02G05500 I
MADS29 Oryza sativa OS02G0170300 I
POPTR_0005s09340 Populus trichocarpa POPTR_0005s09340 I
XM_002310609.1 Populus trichocarpa POPTR_0007s07620 I
POPTR_0012s14770 Populus trichocarpa POPTR_0012s14770 I
POPTR_0015s14950 Populus trichocarpa POPTR_0015s14950 I
PRUPE_ppa011063mg Prunus persica PRUPE_ppa011063mg I
PRUPE_ppa014844mg Prunus persica PRUPE_ppa014844mg I
PRUPE_ppa015966mg Prunus persica PRUPE_ppa015966mg I
Sb04g004736 Sorghum bicolor Sb04g004736 I
SELMODRAFT_449545 Selaginella moellendorffii SELMODRAFT_449545 I
SELMODRAFT_449594 Selaginella moellendorffii SELMODRAFT_449594 I
SELMODRAFT_450804 Selaginella moellendorffii SELMODRAFT_450804 I
SELMODRAFT_450837 Selaginella moellendorffii SELMODRAFT_450837 I
Si018183m.g Setaria italica Si018183m.g I
Solyc11g005120.1 Solanum lycopersicum Solyc11g005120.1 I
TCM_000992 Theobroma cacao TCM_000992 I
TCM_007713 Theobroma cacao TCM_007713 I
TCM_015674 Theobroma cacao TCM_015674 I
Traes_4BL_9A17EA3B7 Triticum aestivum Traes_4BL_9A17EA3B7 I
Traes_6AS_57E50EE92 Triticum aestivum Traes_6AS_57E50EE92 I
Traes_6BS_5789476CB Triticum aestivum Traes_6BS_5789476CB I
Traes_6DS_9BBDCC9F7 Triticum aestivum Traes_6DS_9BBDCC9F7 I
TRIUR3_26896 Triticum urartu TRIUR3_26896 I
TT16 Vitis vinifera VIT_01s0011g01560 I
GOA Vitis vinifera VIT_02s0025g02350 I
VIT_03s0097g00160 Vitis vinifera VIT_03s0097g00160 I
TT16 Vitis vinifera VIT_10s0042g00820 I
Ca_19954 Cicer arietinum Ca_19954 I
Ca_22438 Cicer arietinum Ca_22438 I
Cla010047 Citrullus lanatus Cla010047 I
Pm002166 Prunus mume Pm002166 I
Pm004239 Prunus mume Pm004239 I
30221.m002218 Ricinus communis 30221.m002218 I
cassava5692.m1 Manihot esculenta cassava5692.m1 I
cassava9889.m1 Manihot esculenta cassava9889.m1 I
e_gw1.55.13.1 Physcomitrella patens e_gw1.55.13.1 I
fgenesh1_pg.scaffold_118000119 Physcomitrella patens fgenesh1_pg.scaffold_118000119 I
fgenesh1_pg.scaffold_267000029 Physcomitrella patens fgenesh1_pg.scaffold_267000029 I
mgf008634m Mimulus guttatus mgf008634m I
mgf022278m Mimulus guttatus mgf022278m I
mgf025830m Mimulus guttatus mgf025830m I
Aquca_022_00241 Aquilegia coerulea Aquca_022_00241 I
Ciclev10016394m.g Citrus clementina Ciclev10016394m.g I
Ciclev10032489m.g Citrus clementina Ciclev10032489m.g I
evm.TU.supercontig_30.148 Carica papaya evm.TU.supercontig_30.148 I
gene20015-v1.0-hybrid Fragaria vesca gene20015-v1.0-hybrid I
gene20808-v1.0-hybrid Fragaria vesca gene20808-v1.0-hybrid I
gene26118-v1.0-hybrid Fragaria vesca gene26118-v1.0-hybrid I
Gorai.012G134200 Gossypium raimondii Gorai.012G134200 I
Gorai.013G069000 Gossypium raimondii Gorai.013G069000 I
Lus10010184.g Linum usitatissimum Lus10010184.g I
Lus10017388.g Linum usitatissimum Lus10017388.g I
MDP0000128016 Malus domestica MDP0000128016 I
MDP0000179718 Malus domestica MDP0000179718 I
MDP0000181583 Malus domestica MDP0000181583 I
MDP0000192806 Malus domestica MDP0000192806 I
MDP0000193953 Malus domestica MDP0000193953 I
MDP0000209705 Malus domestica MDP0000209705 I
MDP0000233948 Malus domestica MDP0000233948 I
MDP0000278738 Malus domestica MDP0000278738 I
MDP0000285581 Malus domestica MDP0000285581 I
MDP0000316609 Malus domestica MDP0000316609 I
MDP0000783966 Malus domestica MDP0000783966 I
orange1.1g036652m.g Citrus sinensis orange1.1g036652m.g I
orange1.1g040075m.g Citrus sinensis orange1.1g040075m.g I
Pavir.Aa03173 Panicum virgatum Pavir.Aa03173 I
Pavir.Ab00475 Panicum virgatum Pavir.Ab00475 I
SapurV1A.0103s0250 Salix purpurea SapurV1A.0103s0250 I
SapurV1A.0129s0120 Salix purpurea SapurV1A.0129s0120 I
SapurV1A.0129s0130 Salix purpurea SapurV1A.0129s0130 I
SapurV1A.0129s0140 Salix purpurea SapurV1A.0129s0140 I
SapurV1A.0333s0300 Salix purpurea SapurV1A.0333s0300 I
SapurV1A.4660s0010 Salix purpurea SapurV1A.4660s0010 I
Thhalv10005641m.g Eutrema salsugineum Thhalv10005641m.g I
PK20651.1 Cannabis sativa PK20651.1 I
PK26896.1 Cannabis sativa PK26896.1 I
PK27158.1 Cannabis sativa PK27158.1 I