CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cla019493
(
Citrullus lanatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Cla019493
T225625_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KNOX3_HORVU
M10790_2.00
Hordeum vulgare
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$KNOX3_01
0.599
0.719
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla019493
Homeodomain
55
114
TKKKANLPREAKQILLHWWNSHSQWPYPTDTEKVELAESTGLTRKQINNWFINQRKRHWK
Links
Other
Homeodomain
family TFs
Other
Citrullus lanatus
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRIATDRAFT_34761
Trichoderma atroviride
TRIATDRAFT_34761
N
0.000
MAPG_00964
Magnaporthe poae
MAPG_00964
N
0.000
MGG_12349
Magnaporthe oryzae
MGG_12349
N
0.000
NEUTE1DRAFT_145192
Neurospora tetrasperma
NEUTE1DRAFT_145192
N
0.000
OIDMADRAFT_54905
Oidiodendron maius
OIDMADRAFT_54905
N
0.000
PFICI_04849
Pestalotiopsis fici
PFICI_04849
N
0.000
S40285_00909
Stachybotrys chlorohalonata
S40285_00909
N
0.000
S40288_04025
Stachybotrys chartarum
S40288_04025
N
0.000
SAPIO_CDS7214
Scedosporium apiospermum
SAPIO_CDS7214
N
0.000
MANI_028372
Metarhizium anisopliae
MANI_028372
N
0.000
TRIVIDRAFT_169905
Trichoderma virens
TRIVIDRAFT_169905
N
0.000
V499_07180
Pseudogymnoascus pannorum
V499_07180
N
0.000
VDAG_10262
Verticillium dahliae
VDAG_10262
N
0.000
VDBG_08285
Verticillium alfalfae
VDBG_08285
N
0.000
VHEMI03590
Torrubiella hemipterigena
VHEMI03590
N
0.000
X797_005257
Metarhizium robertsii
X797_005257
N
0.000
estExt_Genewise1.C_31235
Neurospora discreta
estExt_Genewise1.C_31235
N
0.000
NCU08307
Neurospora crassa
NCU08307
N
0.000
FGRRES_09726_M
Fusarium graminearum
FGRRES_09726_M
N
0.000
BBA_05123
Beauveria bassiana
BBA_05123
N
0.000
Bcin12g03220
Botrytis cinerea
Bcin12g03220
N
0.000
CCM_04085
Cordyceps militaris
CCM_04085
N
0.000
CFIO01_08188
Colletotrichum fioriniae
CFIO01_08188
N
0.000
CMQ_4333
Grosmannia clavigera
CMQ_4333
N
0.000
CSUB01_02152
Colletotrichum sublineola
CSUB01_02152
N
0.000
F503_02958
Ophiostoma piceae uamh
F503_02958
N
0.000
FFUJ_04779
Fusarium fujikuroi
FFUJ_04779
N
0.000
VDBG_08285
Verticillium albo atrum
VDBG_08285
N
0.000
FOXG_08339
Fusarium oxysporum
FOXG_08339
N
0.000
FPSE_06112
Fusarium pseudograminearum
FPSE_06112
N
0.000
FVEG_06334
Fusarium verticillioides
FVEG_06334
N
0.000
G647_07147
Cladophialophora carrionii
G647_07147
N
0.000
GGTG_02862
Gaeumannomyces graminis
GGTG_02862
N
0.000
GLRG_05725
Colletotrichum graminicola
GLRG_05725
N
0.000
MAC_00655
Metarhizium acridum
MAC_00655
N
0.000
MAJ_01787
Metarhizium majus
MAJ_01787
N
0.000