Ogr00908 (Ophisaurus gracilis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ogr00908 T226468_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pha-2
M02184_2.00 		Caenorhabditis elegans
NNNATNDNNN
NNNHNATNNN		 PBM
Weirauch et al.(2014)
pTH6423 		0.708 0.772
HHEX
M06541_2.00 		Drosophila melanogaster
WYBAATWA
TWATTVRW		 B1H
Mathelier et al.(2014)
MA0183.1 		0.683 0.667
HHEX
M06358_2.00 		Drosophila melanogaster
WYBAATWA
TWATTVRW		 B1H
Zhu et al.(2011)
CG7056_Cell_FBgn0038852 		0.683 0.667
HHEX
M06359_2.00 		Drosophila melanogaster
NYBAATWR
YWATTVRN		 B1H
Zhu et al.(2011)
CG7056_SOLEXA_FBgn0038852 		0.683 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr00908 Homeodomain 9 65

Links

Other Homeodomain family TFs
Other Ophisaurus gracilis TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava421.valid.m1 Manihot esculenta cassava421.valid.m1 N 0.000
Ciclev10005012m.g Citrus clementina Ciclev10005012m.g N 0.000
Carubv10023272m.g Capsella rubella Carubv10023272m.g N 0.000
Cagra.0914s0005 Capsella grandiflora Cagra.0914s0005 N 0.000
Bostr.11568s0008 Boechera stricta Bostr.11568s0008 N 0.000
Aquca_009_00241 Aquilegia coerulea Aquca_009_00241 N 0.000
mgf019897m Mimulus guttatus mgf019897m N 0.000
mgf017600m Mimulus guttatus mgf017600m N 0.000
Cucsa.338170 Cucumis sativus Cucsa.338170 N 0.000
Eucgr.A02341 Eucalyptus grandis Eucgr.A02341 N 0.000
cassava19560.m1 Manihot esculenta cassava19560.m1 N 0.000
30006.m000282 Ricinus communis 30006.m000282 N 0.000
Ca_07237 Cicer arietinum Ca_07237 N 0.000
VIT_08s0007g08580 Vitis vinifera VIT_08s0007g08580 N 0.000
BBM Vitis vinifera VIT_04s0023g00950 N 0.000
TRIUR3_07433 Triticum urartu TRIUR3_07433 N 0.000
TCM_024554 Theobroma cacao TCM_024554 N 0.000
MDP0000803527 Malus domestica MDP0000803527 N 0.000
chr3.CM0452.130.nd Lotus japonicus chr3.CM0452.130.nd N 0.000
PK18855.1 Cannabis sativa PK18855.1 N 0.000
PK12273.1 Cannabis sativa PK12273.1 N 0.000
Thhalv10016812m.g Eutrema salsugineum Thhalv10016812m.g N 0.000
SapurV1A.3066s0020 Salix purpurea SapurV1A.3066s0020 N 0.000
Pavir.Cb01456 Panicum virgatum Pavir.Cb01456 N 0.000
Pavir.Ca01410 Panicum virgatum Pavir.Ca01410 N 0.000
orange1.1g018292m.g Citrus sinensis orange1.1g018292m.g N 0.000
Si021952m.g Setaria italica Si021952m.g N 0.000
MDP0000314518 Malus domestica MDP0000314518 N 0.000
Lus10040140.g Linum usitatissimum Lus10040140.g N 0.000
Lus10000965.g Linum usitatissimum Lus10000965.g N 0.000
Gorai.003G091500 Gossypium raimondii Gorai.003G091500 N 0.000
gene02470-v1.0-hybrid Fragaria vesca gene02470-v1.0-hybrid N 0.000
evm.TU.supercontig_99.39 Carica papaya evm.TU.supercontig_99.39 N 0.000
evm.TU.supercontig_224.4 Carica papaya evm.TU.supercontig_224.4 N 0.000
BRADI2G26987 Brachypodium distachyon BRADI2G26987 N 0.000
MTR_7g091390 Medicago truncatula MTR_7g091390 N 0.000
MLOC_7325 Hordeum vulgare MLOC_7325 N 0.000
LPERR05G11930 Leersia perrieri LPERR05G11930 N 0.000
GRMZM2G013657 Zea mays GRMZM2G013657 N 0.000
GLYMA19G31960 Glycine max GLYMA19G31960 N 0.000
GLYMA03G29240 Glycine max GLYMA03G29240 N 0.000
fgenesh2_kg.4__2311__AT2G41710.2 Arabidopsis lyrata fgenesh2_kg.4__2311__AT2G41710.2 N 0.000
F775_10869 Aegilops tauschii F775_10869 N 0.000
OB05G22940 Oryza brachyantha OB05G22940 N 0.000
Bra023921 Brassica rapa Bra023921 N 0.000
Bra004641 Brassica rapa Bra004641 N 0.000
Bo4g013420 Brassica oleracea Bo4g013420 N 0.000
Bo3g035770 Brassica oleracea Bo3g035770 N 0.000
BGIOSGA023402 Oryza indica BGIOSGA023402 N 0.000
BGIOSGA019793 Oryza indica BGIOSGA019793 N 0.000
AT2G41710 Arabidopsis thaliana AT2G41710 N 0.000
OMERI06G23370 Oryza meridionalis OMERI06G23370 N 0.000
Sb09g019190 Sorghum bicolor Sb09g019190 N 0.000
PRUPE_ppa006202mg Prunus persica PRUPE_ppa006202mg N 0.000
POPTR_0016s05670 Populus trichocarpa POPTR_0016s05670 N 0.000
POPTR_0006s04820 Populus trichocarpa POPTR_0006s04820 N 0.000
ORUFI05G16140 Oryza rufipogon ORUFI05G16140 N 0.000
ORGLA05G0129100 Oryza glaberrima ORGLA05G0129100 N 0.000
OPUNC05G13110 Oryza punctata OPUNC05G13110 N 0.000
ONIVA05G15390 Oryza nivara ONIVA05G15390 N 0.000
AMTR_s00159p00062070 Amborella trichopoda AMTR_s00159p00062070 N 0.000
OMERI05G13370 Oryza meridionalis OMERI05G13370 N 0.000
OLONG_020459 Oryza longistaminata OLONG_020459 N 0.000
OLONG_002212 Oryza longistaminata OLONG_002212 N 0.000
OGLUM05G15890 Oryza glumaepatula OGLUM05G15890 N 0.000
OBART06G23380 Oryza barthii OBART06G23380 N 0.000
OBART05G15060 Oryza barthii OBART05G15060 N 0.000
OB06G31060 Oryza brachyantha OB06G31060 N 0.000