Ogr16191 (Ophisaurus gracilis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ogr16191 T226594_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.751 0.562
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.751 0.562
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.751 0.562
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.751 0.562
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.751 0.562
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.751 0.562
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.751 0.562
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.751 0.562
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.751 0.562
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.662 0.417
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.662 0.417
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.662 0.417
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr16191 Homeodomain 65 112

Links

Other Homeodomain family TFs
Other Ophisaurus gracilis TFs

1163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SVP Arabidopsis thaliana AT2G22540 D 0.000
AGL15 Arabidopsis thaliana AT5G13790 D 0.000
squamosa Antirrhinum majus CAA45228.1 D 0.000
Q38742_ANTMA Antirrhinum majus Q38742_ANTMA D 0.000
Q9ATE2_PETHY Petunia x hybrida Q9ATE2_PETHY D 0.000
AGL79 Arabidopsis lyrata Al_scaffold_0005_914 I 0.000
AGL71 Arabidopsis lyrata Al_scaffold_0008_1558 I 0.000
AMTR_s00053p00228660 Amborella trichopoda AMTR_s00053p00228660 I 0.000
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I 0.000
AGL79 Arabidopsis thaliana AT3G30260 I 0.000
AGL24 Arabidopsis thaliana AT4G24540 I 0.000
TT16 Arabidopsis thaliana AT5G23260 I 0.000
AGL71 Arabidopsis thaliana AT5G51870 I 0.000
BGIOSGA011317 Oryza indica BGIOSGA011317 I 0.000
Bo1g039080 Brassica oleracea Bo1g039080 I 0.000
Bo2g149440 Brassica oleracea Bo2g149440 I 0.000
Bo2g161560 Brassica oleracea Bo2g161560 I 0.000
Bo4g149800 Brassica oleracea Bo4g149800 I 0.000
Bo7g088660 Brassica oleracea Bo7g088660 I 0.000
Bo7g097810 Brassica oleracea Bo7g097810 I 0.000
Bo7g109590 Brassica oleracea Bo7g109590 I 0.000
Bo8g101000 Brassica oleracea Bo8g101000 I 0.000
Bo9g009030 Brassica oleracea Bo9g009030 I 0.000
Bo9g014270 Brassica oleracea Bo9g014270 I 0.000
Bra013028 Brassica rapa Bra013028 I 0.000
Bra013812 Brassica rapa Bra013812 I 0.000
Bra019221 Brassica rapa Bra019221 I 0.000
Bra020742 Brassica rapa Bra020742 I 0.000
Bra025411 Brassica rapa Bra025411 I 0.000
Bra026507 Brassica rapa Bra026507 I 0.000
Bra029314 Brassica rapa Bra029314 I 0.000
Bra030228 Brassica rapa Bra030228 I 0.000
Bra036201 Brassica rapa Bra036201 I 0.000
Bra038511 Brassica rapa Bra038511 I 0.000
MEF2C Canis familiaris ENSCAFG00000008302 I 0.000
ENSCSAG00000014772 Chlorocebus sabaeus ENSCSAG00000014772 I 0.000
ENSMICG00000005703 Microcebus murinus ENSMICG00000005703 I 0.000
SVP Arabidopsis lyrata fgenesh2_kg.4__174__AT2G22540.1 I 0.000
TT16 Arabidopsis lyrata fgenesh2_kg.6__2319__AT5G23260.2 I 0.000
AGL24 Arabidopsis lyrata fgenesh2_kg.7__1822__AT4G24540.1 I 0.000
GLYMA01G02880 Glycine max GLYMA01G02880 I 0.000
GLYMA02G04710 Glycine max GLYMA02G04710 I 0.000
GLYMA04G10015 Glycine max GLYMA04G10015 I 0.000
GLYMA06G10020 Glycine max GLYMA06G10020 I 0.000
GLYMA07G30040 Glycine max GLYMA07G30040 I 0.000
GLYMA08G07001 Glycine max GLYMA08G07001 I 0.000
GLYMA08G07260 Glycine max GLYMA08G07260 I 0.000
GLYMA11G16105 Glycine max GLYMA11G16105 I 0.000
GLYMA12G17721 Glycine max GLYMA12G17721 I 0.000
GLYMA13G06811 Glycine max GLYMA13G06811 I 0.000
GLYMA13G33031 Glycine max GLYMA13G33031 I 0.000
GLYMA13G33051 Glycine max GLYMA13G33051 I 0.000
GLYMA15G06302 Glycine max GLYMA15G06302 I 0.000
GLYMA15G06314 Glycine max GLYMA15G06314 I 0.000
GLYMA19G04326 Glycine max GLYMA19G04326 I 0.000
GRMZM2G046885 Zea mays GRMZM2G046885 I 0.000
GRMZM2G059102 Zea mays GRMZM2G059102 I 0.000
GRMZM2G137289 Zea mays GRMZM2G137289 I 0.000
GSMUA_Achr10G19290_001 Musa acuminata GSMUA_Achr10G19290_001 I 0.000
GSMUA_Achr2G11820_001 Musa acuminata GSMUA_Achr2G11820_001 I 0.000
GSMUA_Achr3G06800_001 Musa acuminata GSMUA_Achr3G06800_001 I 0.000
GSMUA_Achr5G10250_001 Musa acuminata GSMUA_Achr5G10250_001 I 0.000
GSMUA_Achr9G15180_001 Musa acuminata GSMUA_Achr9G15180_001 I 0.000
LPERR02G27330 Leersia perrieri LPERR02G27330 I 0.000
LPERR03G05670 Leersia perrieri LPERR03G05670 I 0.000
MTR_1g041615 Medicago truncatula MTR_1g041615 I 0.000
MTR_2g009890 Medicago truncatula MTR_2g009890 I 0.000
MTR_4g093970 Medicago truncatula MTR_4g093970 I 0.000
MTR_4g102530 Medicago truncatula MTR_4g102530 I 0.000
MTR_5g032150 Medicago truncatula MTR_5g032150 I 0.000
MTR_5g032520 Medicago truncatula MTR_5g032520 I 0.000
OBART03G06320 Oryza barthii OBART03G06320 I 0.000
OGLUM03G06330 Oryza glumaepatula OGLUM03G06330 I 0.000
OMERI03G06190 Oryza meridionalis OMERI03G06190 I 0.000
ONIVA02G06550 Oryza nivara ONIVA02G06550 I 0.000
OPUNC03G06100 Oryza punctata OPUNC03G06100 I 0.000
ORGLA03G0061100 Oryza glaberrima ORGLA03G0061100 I 0.000
ORUFI03G06210 Oryza rufipogon ORUFI03G06210 I 0.000
OS03G0186600 Oryza sativa OS03G0186600 I 0.000
PGSC0003DMG400001378 Solanum tuberosum PGSC0003DMG400001378 I 0.000
PGSC0003DMG400009363 Solanum tuberosum PGSC0003DMG400009363 I 0.000
PGSC0003DMG400016203 Solanum tuberosum PGSC0003DMG400016203 I 0.000
PGSC0003DMG400023729 Solanum tuberosum PGSC0003DMG400023729 I 0.000
PGSC0003DMG400026563 Solanum tuberosum PGSC0003DMG400026563 I 0.000
PGSC0003DMG400033570 Solanum tuberosum PGSC0003DMG400033570 I 0.000
POPTR_0002s10570 Populus trichocarpa POPTR_0002s10570 I 0.000
POPTR_0004s11430 Populus trichocarpa POPTR_0004s11430 I 0.000
POPTR_0007s03270 Populus trichocarpa POPTR_0007s03270 I 0.000
POPTR_0007s03290 Populus trichocarpa POPTR_0007s03290 I 0.000
POPTR_0007s03310 Populus trichocarpa POPTR_0007s03310 I 0.000
POPTR_0007s14300 Populus trichocarpa POPTR_0007s14300 I 0.000
AGL15 Populus trichocarpa POPTR_0009s06060 I 0.000
POPTR_0017s07170 Populus trichocarpa POPTR_0017s07170 I 0.000
POPTR_0017s13400 Populus trichocarpa POPTR_0017s13400 I 0.000
PRUPE_ppa010249mg Prunus persica PRUPE_ppa010249mg I 0.000
PRUPE_ppa010308mg Prunus persica PRUPE_ppa010308mg I 0.000
PRUPE_ppa011063mg Prunus persica PRUPE_ppa011063mg I 0.000
PRUPE_ppa022274mg Prunus persica PRUPE_ppa022274mg I 0.000
Sb01g044810 Sorghum bicolor Sb01g044810 I 0.000
SELMODRAFT_449545 Selaginella moellendorffii SELMODRAFT_449545 I 0.000
SELMODRAFT_449594 Selaginella moellendorffii SELMODRAFT_449594 I 0.000
SELMODRAFT_450804 Selaginella moellendorffii SELMODRAFT_450804 I 0.000
SELMODRAFT_450837 Selaginella moellendorffii SELMODRAFT_450837 I 0.000
Si007641m.g Setaria italica Si007641m.g I 0.000
Si037358m.g Setaria italica Si037358m.g I 0.000
Solyc01g105800.2 Solanum lycopersicum Solyc01g105800.2 I 0.000
Solyc02g089210.2 Solanum lycopersicum Solyc02g089210.2 I 0.000
Solyc10g080030.1 Solanum lycopersicum Solyc10g080030.1 I 0.000
Solyc11g010570.1 Solanum lycopersicum Solyc11g010570.1 I 0.000
TCM_000992 Theobroma cacao TCM_000992 I 0.000
TCM_007378 Theobroma cacao TCM_007378 I 0.000
TCM_034501 Theobroma cacao TCM_034501 I 0.000
Traes_7DS_366A869CF Triticum aestivum Traes_7DS_366A869CF I 0.000
SVP Vitis vinifera VIT_00s0313g00070 I 0.000
VIT_00s0729g00010 Vitis vinifera VIT_00s0729g00010 I 0.000
TT16 Vitis vinifera VIT_01s0011g01560 I 0.000
VIT_03s0017g00360 Vitis vinifera VIT_03s0017g00360 I 0.000
VIT_03s0017g00440 Vitis vinifera VIT_03s0017g00440 I 0.000
VIT_03s0017g00450 Vitis vinifera VIT_03s0017g00450 I 0.000
VIT_03s0167g00100 Vitis vinifera VIT_03s0167g00100 I 0.000
AGL79 Vitis vinifera VIT_14s0083g01030 I 0.000
VIT_15s0024g01860 Vitis vinifera VIT_15s0024g01860 I 0.000
VIT_15s0024g02000 Vitis vinifera VIT_15s0024g02000 I 0.000
VIT_15s0107g00120 Vitis vinifera VIT_15s0107g00120 I 0.000
AGL24 Vitis vinifera VIT_18s0001g07460 I 0.000
Aan_R013766 Calypte anna Aan_R013766 I 0.000
Afo_R010314 Aptenodytes forsteri Afo_R010314 I 0.000
Brh_R003791 Buceros rhinoceros Brh_R003791 I 0.000
Ca_01491 Cicer arietinum Ca_01491 I 0.000
Ca_12416 Cicer arietinum Ca_12416 I 0.000
Ca_21060 Cicer arietinum Ca_21060 I 0.000
Cla010047 Citrullus lanatus Cla010047 I 0.000
Cla010989 Citrullus lanatus Cla010989 I 0.000
Cla014322 Citrullus lanatus Cla014322 I 0.000
Cla022499 Citrullus lanatus Cla022499 I 0.000
ENSP00000396219-D1 Bos grunniens ENSP00000396219-D1 I 0.000
Gfo_R008233 Geospiza fortis Gfo_R008233 I 0.000
Pm002166 Prunus mume Pm002166 I 0.000
Pm015397 Prunus mume Pm015397 I 0.000
Pm022002 Prunus mume Pm022002 I 0.000
Pm025026 Prunus mume Pm025026 I 0.000
29838.m001690 Ricinus communis 29838.m001690 I 0.000
cassava1567.valid.m1 Manihot esculenta cassava1567.valid.m1 I 0.000
cassava2598.m1 Manihot esculenta cassava2598.m1 I 0.000
cassava31070.valid.m1 Manihot esculenta cassava31070.valid.m1 I 0.000
cassava31071.valid.m1 Manihot esculenta cassava31071.valid.m1 I 0.000
cassava39138.m1 Manihot esculenta cassava39138.m1 I 0.000
cassava42879.valid.m1 Manihot esculenta cassava42879.valid.m1 I 0.000
Cucsa.104010 Cucumis sativus Cucsa.104010 I 0.000
Cucsa.160640 Cucumis sativus Cucsa.160640 I 0.000
Cucsa.174530 Cucumis sativus Cucsa.174530 I 0.000
Cucsa.331840 Cucumis sativus Cucsa.331840 I 0.000
e_gw1.171.4.1 Physcomitrella patens e_gw1.171.4.1 I 0.000
e_gw1.209.37.1 Physcomitrella patens e_gw1.209.37.1 I 0.000
e_gw1.55.13.1 Physcomitrella patens e_gw1.55.13.1 I 0.000
estExt_fgenesh1_kg.C_260002 Physcomitrella patens estExt_fgenesh1_kg.C_260002 I 0.000
fgenesh1_pg.scaffold_118000119 Physcomitrella patens fgenesh1_pg.scaffold_118000119 I 0.000
mgf015964m Mimulus guttatus mgf015964m I 0.000
mgf023192m Mimulus guttatus mgf023192m I 0.000
mgf025830m Mimulus guttatus mgf025830m I 0.000
Aquca_009_00337 Aquilegia coerulea Aquca_009_00337 I 0.000
Aquca_015_00177 Aquilegia coerulea Aquca_015_00177 I 0.000
Aquca_035_00266 Aquilegia coerulea Aquca_035_00266 I 0.000
Bostr.0556s0620 Boechera stricta Bostr.0556s0620 I 0.000
Bostr.10199s0104 Boechera stricta Bostr.10199s0104 I 0.000
Bostr.19427s0024 Boechera stricta Bostr.19427s0024 I 0.000
Bostr.7867s0261 Boechera stricta Bostr.7867s0261 I 0.000
Cagra.1080s0011 Capsella grandiflora Cagra.1080s0011 I 0.000
Cagra.2171s0007 Capsella grandiflora Cagra.2171s0007 I 0.000
Cagra.2834s0001 Capsella grandiflora Cagra.2834s0001 I 0.000
Cagra.4348s0011 Capsella grandiflora Cagra.4348s0011 I 0.000
Carubv10002792m.g Capsella rubella Carubv10002792m.g I 0.000
Carubv10005653m.g Capsella rubella Carubv10005653m.g I 0.000
Carubv10018408m.g Capsella rubella Carubv10018408m.g I 0.000
Carubv10023941m.g Capsella rubella Carubv10023941m.g I 0.000
Ciclev10005698m.g Citrus clementina Ciclev10005698m.g I 0.000
Ciclev10026457m.g Citrus clementina Ciclev10026457m.g I 0.000
Ciclev10029776m.g Citrus clementina Ciclev10029776m.g I 0.000
Eucgr.F00420 Eucalyptus grandis Eucgr.F00420 I 0.000
Eucgr.F02141 Eucalyptus grandis Eucgr.F02141 I 0.000
Eucgr.F02146 Eucalyptus grandis Eucgr.F02146 I 0.000
Eucgr.I00556 Eucalyptus grandis Eucgr.I00556 I 0.000
Eucgr.I02059 Eucalyptus grandis Eucgr.I02059 I 0.000
Eucgr.I02600 Eucalyptus grandis Eucgr.I02600 I 0.000
Eucgr.K02547 Eucalyptus grandis Eucgr.K02547 I 0.000
evm.TU.contig_33612 Carica papaya evm.TU.contig_33612 I 0.000
evm.TU.supercontig_21.11 Carica papaya evm.TU.supercontig_21.11 I 0.000
evm.TU.supercontig_55.31 Carica papaya evm.TU.supercontig_55.31 I 0.000
gene04228-v1.0-hybrid Fragaria vesca gene04228-v1.0-hybrid I 0.000
gene05027-v1.0-hybrid Fragaria vesca gene05027-v1.0-hybrid I 0.000
gene12119-v1.0-hybrid Fragaria vesca gene12119-v1.0-hybrid I 0.000
gene12120-v1.0-hybrid Fragaria vesca gene12120-v1.0-hybrid I 0.000
gene20808-v1.0-hybrid Fragaria vesca gene20808-v1.0-hybrid I 0.000
gene29503-v1.0-hybrid Fragaria vesca gene29503-v1.0-hybrid I 0.000
gene30741-v1.0-hybrid Fragaria vesca gene30741-v1.0-hybrid I 0.000
Gorai.001G090000 Gossypium raimondii Gorai.001G090000 I 0.000
Gorai.002G142700 Gossypium raimondii Gorai.002G142700 I 0.000
Gorai.005G147200 Gossypium raimondii Gorai.005G147200 I 0.000
Gorai.005G225500 Gossypium raimondii Gorai.005G225500 I 0.000
Gorai.008G017200 Gossypium raimondii Gorai.008G017200 I 0.000
Gorai.008G092300 Gossypium raimondii Gorai.008G092300 I 0.000
Gorai.010G035000 Gossypium raimondii Gorai.010G035000 I 0.000
Gorai.013G055700 Gossypium raimondii Gorai.013G055700 I 0.000
Lus10005081.g Linum usitatissimum Lus10005081.g I 0.000
Lus10005325.g Linum usitatissimum Lus10005325.g I 0.000
Lus10007100.g Linum usitatissimum Lus10007100.g I 0.000
Lus10020477.g Linum usitatissimum Lus10020477.g I 0.000
Lus10025719.g Linum usitatissimum Lus10025719.g I 0.000
Lus10034370.g Linum usitatissimum Lus10034370.g I 0.000
Lus10035942.g Linum usitatissimum Lus10035942.g I 0.000
MDP0000135652 Malus domestica MDP0000135652 I 0.000
MDP0000144516 Malus domestica MDP0000144516 I 0.000
MDP0000209705 Malus domestica MDP0000209705 I 0.000
MDP0000233948 Malus domestica MDP0000233948 I 0.000
orange1.1g027190m.g Citrus sinensis orange1.1g027190m.g I 0.000
orange1.1g034384m.g Citrus sinensis orange1.1g034384m.g I 0.000
orange1.1g039982m.g Citrus sinensis orange1.1g039982m.g I 0.000
orange1.1g040972m.g Citrus sinensis orange1.1g040972m.g I 0.000
Pavir.Da01333 Panicum virgatum Pavir.Da01333 I 0.000
Pavir.Db00414 Panicum virgatum Pavir.Db00414 I 0.000
Pavir.Ia04527 Panicum virgatum Pavir.Ia04527 I 0.000
SapurV1A.0004s1140 Salix purpurea SapurV1A.0004s1140 I 0.000
SapurV1A.0027s0860 Salix purpurea SapurV1A.0027s0860 I 0.000
SapurV1A.0187s0010 Salix purpurea SapurV1A.0187s0010 I 0.000
SapurV1A.0463s0130 Salix purpurea SapurV1A.0463s0130 I 0.000
SapurV1A.1777s0020 Salix purpurea SapurV1A.1777s0020 I 0.000
Thhalv10000308m.g Eutrema salsugineum Thhalv10000308m.g I 0.000
Thhalv10004826m.g Eutrema salsugineum Thhalv10004826m.g I 0.000
Thhalv10005641m.g Eutrema salsugineum Thhalv10005641m.g I 0.000
Thhalv10026757m.g Eutrema salsugineum Thhalv10026757m.g I 0.000
PK08595.1 Cannabis sativa PK08595.1 I 0.000
PK11571.1 Cannabis sativa PK11571.1 I 0.000
PK20651.1 Cannabis sativa PK20651.1 I 0.000
PK28167.1 Cannabis sativa PK28167.1 I 0.000
chr6.CM0055.180.nc Lotus japonicus chr6.CM0055.180.nc I 0.000
LjT38P01.180.nd Lotus japonicus LjT38P01.180.nd I 0.000
NECAME_18899 Necator americanus NECAME_18899 I 0.000
Cla013108 Citrullus lanatus Cla013108 N 0.000
Cucsa.190400 Cucumis sativus Cucsa.190400 N 0.000
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.000