e_gw1.431.18.1 (Physcomitrella patens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 e_gw1.431.18.1 T227261_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_gwp_gw1.C_70211
M02220_2.00 		Physcomitrella patens
HMATNANDNN
NNHNTNATKD		 PBM
Weirauch et al.(2014)
pTH8489 		0.863 0.929
ATHB-13
M06900_2.00 		Arabidopsis thaliana
HYAATAATTDD
HHAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB13_col_a 		0.827 0.786
ATHB-13
M06901_2.00 		Arabidopsis thaliana
NYAATAATTRW
WYAATTATTRN		 Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a 		0.827 0.786
ATHB-16
M02050_2.00 		Arabidopsis thaliana
YAATMATT
AATKATTR		 PBM
Weirauch et al.(2014)
pTH7270 		0.825 0.839
ATHB-6
M02040_2.00 		Arabidopsis thaliana
HATNATTDN
NHAATNATD		 PBM
Weirauch et al.(2014)
pTH7670 		0.825 0.821
ATHB-6
M06909_2.00 		Arabidopsis thaliana
NNNHATKATTR
YAATMATDNNN		 Dap-seq
OMalley et al.(2016)
ATHB6_col_a 		0.825 0.821
ATHB-6
M06910_2.00 		Arabidopsis thaliana
NCAATAATTRN
NYAATTATTGN		 Dap-seq
OMalley et al.(2016)
ATHB6_colamp_a 		0.825 0.821
HAT5
M06914_2.00 		Arabidopsis thaliana
NHAATAATTDW
WHAATTATTDN		 Dap-seq
OMalley et al.(2016)
HAT5_col_a 		0.813 0.839
HAT5
M06915_2.00 		Arabidopsis thaliana
WNYAATAATTRWDN
NHWYAATTATTRNW		 Dap-seq
OMalley et al.(2016)
HAT5_colamp_a 		0.813 0.839
HAT5
M02683_2.00 		Arabidopsis thaliana
SCAATAATTNNV
BNNAATTATTGS		 SELEX
Mathelier et al.(2014)
MA0008.2 		0.813 0.839
HAT5
M10624_2.00 		Arabidopsis thaliana
YSCAATAATTNNVN
NBNNAATTATTGSR		 Transfac
Matys et al.(2006)
P$ATHB1_01 		0.813 0.839
ATHB-5
M06932_2.00 		Arabidopsis thaliana
NYAATMATTND
HNAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_col_a 		0.807 0.786
ATHB-5
M06933_2.00 		Arabidopsis thaliana
NYAATMATTN
NAATKATTRN		 Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a 		0.807 0.786
ATHB-5
M02684_2.00 		Arabidopsis thaliana
CAATVATTGVVSV
BSBBCAATBATTG		 SELEX
Mathelier et al.(2014)
MA0110.2 		0.807 0.786
ATHB-5
M10630_2.00 		Arabidopsis thaliana
CAATVATTG
CAATBATTG		 Transfac
Matys et al.(2006)
P$ATHB5_01 		0.807 0.786
ATHB-21
M06907_2.00 		Arabidopsis thaliana
NNWHCAATWATTDN
NHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB21_col_a 		0.768 0.679
ATHB-21
M06908_2.00 		Arabidopsis thaliana
WWDDNNNHAATWATTGDTNN
NNAHCAATWATTDNNNHHWW		 Dap-seq
OMalley et al.(2016)
ATHB21_colamp_a 		0.768 0.679
HB-5
M06924_2.00 		Arabidopsis thaliana
NNAHCAATWATTKDNNNHWWH
DWWDNNNHMAATWATTGDTNN		 Dap-seq
OMalley et al.(2016)
ATHB40_col_a 		0.766 0.679
HB-5
M06925_2.00 		Arabidopsis thaliana
HHAATWATTGDWNN
NNWHCAATWATTDD		 Dap-seq
OMalley et al.(2016)
ATHB40_colamp_a 		0.766 0.679
ATHB-53
M06934_2.00 		Arabidopsis thaliana
HMAATAATTRD
HYAATTATTKD		 Dap-seq
OMalley et al.(2016)
ATHB53_col_a 		0.761 0.643
ATHB-53
M06935_2.00 		Arabidopsis thaliana
NNWHCAATWATTDDN
NHHAATWATTGDWNN		 Dap-seq
OMalley et al.(2016)
ATHB53_colamp_a 		0.761 0.643
PK20392.1
M01250_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11331 		0.689 0.786
PK20392.1
M01251_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11332 		0.689 0.786
ATHB-20
M06912_2.00 		Arabidopsis thaliana
HYAATAATTRD
HYAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_col_a 		0.669 0.732
ATHB-20
M06913_2.00 		Arabidopsis thaliana
HYAATMATTRD
HYAATKATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a 		0.669 0.732
ATHB-51
M00867_2.00 		Arabidopsis thaliana
ATWATKNN
NNMATWAT		 PBM
Franco-Zorrilla et al.(2014)
ATHB51 		0.602 0.643
ATHB-51
M06927_2.00 		Arabidopsis thaliana
DNCAATAATTGAD
HTCAATTATTGNH		 Dap-seq
OMalley et al.(2016)
LMI1_col_a 		0.602 0.643
ATHB-51
M06928_2.00 		Arabidopsis thaliana
NDNCAATAATTGA
TCAATTATTGNHN		 Dap-seq
OMalley et al.(2016)
LMI1_colamp_a 		0.602 0.643
ATHB-22
M02041_2.00 		Arabidopsis thaliana
NNATAATWWWNNN
NNNWWWATTATNN		 PBM
Weirauch et al.(2014)
pTH5883 		0.599 0.607
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.431.18.1 Homeodomain 132 187

Links

Other Homeodomain family TFs
Other Physcomitrella patens TFs

838 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HHEX Drosophila melanogaster FBgn0038852 D
pha-2 Caenorhabditis elegans WBGene00004011 D
CpipJ_CPIJ003318 Culex pipiens CpipJ_CPIJ003318 I
WUBG_10995 Wuchereria bancrofti WUBG_10995 I
AAEL004707 Aedes aegypti AAEL004707 I
AGAP001389 Anopheles gambiae AGAP001389 I
BGIBMGA010054 Bombyx mori BGIBMGA010054 I
Bm5107 Brugia malayi Bm5107 I
CapteG110019 Capitella teleta CapteG110019 I
CapteG129537 Capitella teleta CapteG129537 I
CBG08137 Caenorhabditis briggsae CBG08137 I
CBN29205 Caenorhabditis brenneri CBN29205 I
CGI_10025054 Crassostrea gigas CGI_10025054 I
CPIJ003318 Culex quinquefasciatus CPIJ003318 I
CRE17126 Caenorhabditis remanei CRE17126 I
DAPPUDRAFT_229438 Daphnia pulex DAPPUDRAFT_229438 I
HHEX Anolis carolinensis ENSACAG00000006660 I
ENSAMEG00000014091 Ailuropoda melanoleuca ENSAMEG00000014091 I
ENSAMXG00000011188 Astyanax mexicanus ENSAMXG00000011188 I
ENSAPLG00000004046 Anas platyrhynchos ENSAPLG00000004046 I
HHEX Bos taurus ENSBTAG00000014217 I
HHEX Canis familiaris ENSCAFG00000007502 I
HHEX Choloepus hoffmanni ENSCHOG00000005837 I
hex Ciona intestinalis ENSCING00000001270 I
HHEX Callithrix jacchus ENSCJAG00000008627 I
ENSCPOG00000021993 Cavia porcellus ENSCPOG00000021993 I
ENSCSAG00000006543 Chlorocebus sabaeus ENSCSAG00000006543 I
ENSCSAVG00000001801 Ciona savignyi ENSCSAVG00000001801 I
HHEX Dasypus novemcinctus ENSDNOG00000041940 I
HHEX Equus caballus ENSECAG00000005199 I
ENSFALG00000007921 Ficedula albicollis ENSFALG00000007921 I
HHEX Felis catus ENSFCAG00000023875 I
HHEX Homo sapiens ENSG00000152804 I
HHEX Gasterosteus aculeatus ENSGACG00000015385 I
ENSGALG00000029169 Gallus gallus ENSGALG00000029169 I
ENSGGOG00000026464 Gorilla gorilla ENSGGOG00000026464 I
ENSGGOG00000027676 Gorilla gorilla ENSGGOG00000027676 I
ENSGMOG00000011697 Gadus morhua ENSGMOG00000011697 I
ENSLACG00000009588 Latimeria chalumnae ENSLACG00000009588 I
ENSLACG00000014170 Latimeria chalumnae ENSLACG00000014170 I
ENSLAFG00000005359 Loxodonta africana ENSLAFG00000005359 I
ENSLOCG00000007051 Lepisosteus oculatus ENSLOCG00000007051 I
ENSMEUG00000004291 Macropus eugenii ENSMEUG00000004291 I
ENSMGAG00000009052 Meleagris gallopavo ENSMGAG00000009052 I
ENSMLUG00000013333 Myotis lucifugus ENSMLUG00000013333 I
ENSMLUG00000024763 Myotis lucifugus ENSMLUG00000024763 I
HHEX Macaca mulatta ENSMMUG00000011789 I
HHEX Monodelphis domestica ENSMODG00000006444 I
ENSMPUG00000017219 Mustela putorius furo ENSMPUG00000017219 I
Hhex Mus musculus ENSMUSG00000024986 I
HHEX Oryctolagus cuniculus ENSOCUG00000016719 I
HHEX Otolemur garnettii ENSOGAG00000015201 I
ENSONIG00000007247 Oreochromis niloticus ENSONIG00000007247 I
HHEX Ochotona princeps ENSOPRG00000003896 I
ENSPANG00000021555 Papio anubis ENSPANG00000021555 I
ENSPFOG00000009869 Poecilia formosa ENSPFOG00000009869 I
ENSPMAG00000009445 Petromyzon marinus ENSPMAG00000009445 I
ENSPPYG00000002486 Pongo abelii ENSPPYG00000002486 I
ENSPSIG00000015884 Pelodiscus sinensis ENSPSIG00000015884 I
HHEX Pan troglodytes ENSPTRG00000002760 I
HHEX Pteropus vampyrus ENSPVAG00000007094 I
Hhex Rattus norvegicus ENSRNOG00000016595 I
ENSSHAG00000018185 Sarcophilus harrisii ENSSHAG00000018185 I
ENSSSCG00000010472 Sus scrofa ENSSSCG00000010472 I
ENSSTOG00000006255 Ictidomys tridecemlineatus ENSSTOG00000006255 I
ENSTBEG00000001339 Tupaia belangeri ENSTBEG00000001339 I
ENSTGUG00000008924 Taeniopygia guttata ENSTGUG00000008924 I
ENSTGUG00000013882 Taeniopygia guttata ENSTGUG00000013882 I
HHEX Tetraodon nigroviridis ENSTNIG00000005879 I
HHEX Takifugu rubripes ENSTRUG00000004234 I
HHEX Tursiops truncatus ENSTTRG00000012365 I
HHEX Vicugna pacos ENSVPAG00000009916 I
GA20065 Drosophila pseudoobscura FBgn0080061 I
GF18520 Drosophila ananassae FBgn0095538 I
GG14915 Drosophila erecta FBgn0107169 I
GH19308 Drosophila grimshawi FBgn0126773 I
GI23524 Drosophila mojavensis FBgn0146250 I
GL12681 Drosophila persimilis FBgn0150287 I
GM15106 Drosophila sechellia FBgn0170026 I
GD20010 Drosophila simulans FBgn0191493 I
GJ10276 Drosophila virilis FBgn0197562 I
GK13080 Drosophila willistoni FBgn0215089 I
HelroG80789 Helobdella robusta HelroG80789 I
HMEL004646 Heliconius melpomene HMEL004646 I
KGM_13906 Danaus plexippus KGM_13906 I
L798_02156 Zootermopsis nevadensis L798_02156 I
LOAG_11830 Loa loa LOAG_11830 I
LotgiG128951 Lottia gigantea LotgiG128951 I
NEMVEDRAFT_v1g39891 Nematostella vectensis NEMVEDRAFT_v1g39891 I
SMAR000779 Strigamia maritima SMAR000779 I
SPU_027215 Strongylocentrotus purpuratus SPU_027215 I
TC004555 Tribolium castaneum TC004555 I
tetur29g00560 Tetranychus urticae tetur29g00560 I
TriadG9560 Trichoplax adhaerens TriadG9560 I
WBGene00240685 Onchocerca volvulus WBGene00240685 I
Aan_R007509 Calypte anna Aan_R007509 I
Afo_R002655 Aptenodytes forsteri Afo_R002655 I
Alligator_sinensis_CCG013675.1 Alligator sinensis Alligator_sinensis_CCG013675.1 I
Brh_R009926 Buceros rhinoceros Brh_R009926 I
Cmyd_10016939 Chelonia mydas Cmyd_10016939 I
ENSBTAP00000018899-D1 Bos grunniens ENSBTAP00000018899-D1 I
ENSP00000282728 Macaca fascicularis ENSP00000282728 I
Gfo_R002376 Geospiza fortis Gfo_R002376 I
Myotis_brandtii_KIF11_10018005 Myotis brandtii Myotis_brandtii_KIF11_10018005 I
Ogr00908 Ophisaurus gracilis Ogr00908 I
Pvit_14369 Pogona vitticeps Pvit_14369 I
Tal_R011621 Tyto alba Tal_R011621 I
e_gw.54.243.1 Branchiostoma floridae e_gw.54.243.1 I
e_gw.56.215.1 Branchiostoma floridae e_gw.56.215.1 I
Sakowv30040087m.g Saccoglossus kowalevskii Sakowv30040087m.g I
LCUP007736 Lucilia cuprina LCUP007736 I
hhex Xenopus tropicalis XB-GENE-487159 I
hhex.L Xenopus laevis XB-GENE-865680 I
AARA001840 Anopheles arabiensis AARA001840 I
AATE006277 Anopheles atroparvus AATE006277 I
ACHR001525 Anopheles christyi ACHR001525 I
ACOM034050 Anopheles coluzzii ACOM034050 I
ACUA024331 Anopheles culicifacies ACUA024331 I
ADIR002846 Anopheles dirus ADIR002846 I
AEPI001110 Anopheles epiroticus AEPI001110 I
AFAF018650 Anopheles farauti AFAF018650 I
AFUN007808 Anopheles funestus AFUN007808 I
AMAM015319 Anopheles maculatus AMAM015319 I
AMEC012825 Anopheles melas AMEC012825 I
AMEM017315 Anopheles merus AMEM017315 I
AMIN000568 Anopheles minimus AMIN000568 I
AQUA006568 Anopheles quadriannulatus AQUA006568 I
ASIS014034 Anopheles sinensis ASIS014034 I
ASTEI07538 Anopheles stephensi ASTEI07538 I
LLOJ007496 Lutzomyia longipalpis LLOJ007496 I
ACOC_0000843601 Angiostrongylus costaricensis ACOC_0000843601 I
ASIM_0001155801 Anisakis simplex ASIM_0001155801 I
ASU_02199 Ascaris suum ASU_02199 I
augustus_masked-nMf.1.1.scaf09384-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf09384-processed-gene-0.0 I
BTMF_0001400701 Brugia timori BTMF_0001400701 I
BXY_0632900 Bursaphelenchus xylophilus BXY_0632900 I
DME_0000899101 Dracunculus medinensis DME_0000899101 I
GPLIN_000004000 Globodera pallida GPLIN_000004000 I
HCOI01904700 Haemonchus contortus HCOI01904700 I
HPLM_0000551901 Haemonchus placei HPLM_0000551901 I
L596_g25649 Steinernema carpocapsae L596_g25649 I
L889_g29725 Steinernema feltiae L889_g29725 I
L892_g7017 Steinernema scapterisci L892_g7017 I
L898_g1404 Steinernema monticolum L898_g1404 I
MhA1_Contig193.frz3.gene1 Meloidogyne hapla MhA1_Contig193.frz3.gene1 I
nAv.1.0.1.g00022 Acanthocheilonema viteae nAv.1.0.1.g00022 I
NBR_0000887601 Nippostrongylus brasiliensis NBR_0000887601 I
nDi.2.2.2.g05290 Dirofilaria immitis nDi.2.2.2.g05290 I
nLs.2.1.2.g00270 Litomosoides sigmodontis nLs.2.1.2.g00270 I
nOo.2.0.1.g09114 Onchocerca ochengi nOo.2.0.1.g09114 I
nRc.2.0.1.g06585 Romanomermis culicivorax nRc.2.0.1.g06585 I
OFLC_0000354301 Onchocerca flexuosa OFLC_0000354301 I
PTRK_0000720600 Parastrongyloides trichosuri PTRK_0000720600 I
RSKR_0000094800 Rhabditophanes kr3021 RSKR_0000094800 I
scaffold24-EXSNAP2012.65 Pristionchus exspectatus scaffold24-EXSNAP2012.65 I
SPAL_0000841600 Strongyloides papillosus SPAL_0000841600 I
SSTP_0000145800 Strongyloides stercoralis SSTP_0000145800 I
SVE_1799000 Strongyloides venezuelensis SVE_1799000 I
TCLT_0000379201 Thelazia callipaeda TCLT_0000379201 I
TELCIR_00798 Teladorsagia circumcincta TELCIR_00798 I