CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw.239.46.1
(
Branchiostoma floridae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
e_gw.239.46.1
T227273_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.239.46.1
Homeodomain
1
53
MSYLSSQLERLEEEFKKDKYLSVSKRVELAESLELTEIQVKTWFQNRRTKWKK
Links
Other
Homeodomain
family TFs
Other
Branchiostoma floridae
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nkx6.1
Takifugu rubripes
ENSTRUG00000018648
I
0.610
ENSNLEG00000012707
Nomascus leucogenys
ENSNLEG00000012707
N
0.677
e_gw.11.656.1
Branchiostoma floridae
e_gw.11.656.1
N
0.662
Ocbimv22024994m.g
Octopus bimaculoides
Ocbimv22024994m.g
N
0.632
Minc14640
Meloidogyne incognita
Minc14640
N
0.705
ACHR008505
Anopheles christyi
ACHR008505
N
0.671
ACUA020431
Anopheles culicifacies
ACUA020431
N
0.671
AEPI010384
Anopheles epiroticus
AEPI010384
N
0.671
BGLB006778
Biomphalaria glabrata
BGLB006778
N
0.603
ASIM_0000060401
Anisakis simplex
ASIM_0000060401
N
0.701
ASIM_0001450801
Anisakis simplex
ASIM_0001450801
N
0.701
augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0
N
0.626
GPLIN_000747600
Globodera pallida
GPLIN_000747600
N
0.655
GPLIN_001545800
Globodera pallida
GPLIN_001545800
N
0.714
maker-nMf.1.1.scaf05303-snap-gene-0.9
Meloidogyne floridensis
maker-nMf.1.1.scaf05303-snap-gene-0.9
N
0.705
SBAD_0000185501
Soboliphyme baturini
SBAD_0000185501
N
0.638