CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPLIN_000747600
(
Globodera pallida
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
GPLIN_000747600
T234039_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_000747600
Homeodomain
1
54
MRFSRDQLDMLECAFQQRHYLSHSDLEKLAASWLSVAEWHVKMWFQNRRAKDKR
Links
Other
Homeodomain
family TFs
Other
Globodera pallida
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPLIN_001545800
Globodera pallida
GPLIN_001545800
N
0.725
GPLIN_000208300
Globodera pallida
GPLIN_000208300
N
0.716
ENSNLEG00000012707
Nomascus leucogenys
ENSNLEG00000012707
N
0.708
e_gw.239.46.1
Branchiostoma floridae
e_gw.239.46.1
N
0.655
maker-nMf.1.1.scaf05303-snap-gene-0.9
Meloidogyne floridensis
maker-nMf.1.1.scaf05303-snap-gene-0.9
N
0.650
Minc14640
Meloidogyne incognita
Minc14640
N
0.650
gw1.10.236.1
Phycomyces blakesleeanus
gw1.10.236.1
N
0.613
GM17434
Drosophila sechellia
FBgn0172344
I
0.608