estExt_fgeneshDP_pg.C_350041 (Dictyostelium purpureum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 estExt_fgeneshDP_pg.C_350041 T227408_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CAD26261
M02055_2.00 		Encephalitozoon cuniculi
NNYAATWWA
TWWATTRNN		 PBM
Weirauch et al.(2014)
pTH6363 		0.705 0.526
NEMVEDRAFT_v1g105595
M02143_2.00 		Nematostella vectensis
NTWATWRN
NYWATWAN		 PBM
Weirauch et al.(2014)
pTH5503 		0.657 0.439
hbx10
M02074_2.00 		Dictyostelium discoideum
NYAATWWN
NWWATTRN		 PBM
Weirauch et al.(2014)
pTH5547 		0.618 0.544
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgeneshDP_pg.C_350041 Homeodomain 129 185

Links

Other Homeodomain family TFs
Other Dictyostelium purpureum TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC083 Arabidopsis thaliana AT5G13180 D 0.000
cassava1138.valid.m1 Manihot esculenta cassava1138.valid.m1 I 0.000
chr1.CM0017.80.nc Lotus japonicus chr1.CM0017.80.nc I 0.000
cassava12891.valid.m1 Manihot esculenta cassava12891.valid.m1 I 0.000
Cucsa.349370 Cucumis sativus Cucsa.349370 I 0.000
Aquca_011_00050 Aquilegia coerulea Aquca_011_00050 I 0.000
Aquca_021_00051 Aquilegia coerulea Aquca_021_00051 I 0.000
Bostr.23794s0753 Boechera stricta Bostr.23794s0753 I 0.000
Bostr.2902s0053 Boechera stricta Bostr.2902s0053 I 0.000
Cagra.0596s0010 Capsella grandiflora Cagra.0596s0010 I 0.000
Carubv10002548m.g Capsella rubella Carubv10002548m.g I 0.000
Ciclev10032547m.g Citrus clementina Ciclev10032547m.g I 0.000
Eucgr.B03537 Eucalyptus grandis Eucgr.B03537 I 0.000
Eucgr.H03387 Eucalyptus grandis Eucgr.H03387 I 0.000
evm.TU.supercontig_99.63 Carica papaya evm.TU.supercontig_99.63 I 0.000
Gorai.005G195300 Gossypium raimondii Gorai.005G195300 I 0.000
Gorai.012G125500 Gossypium raimondii Gorai.012G125500 I 0.000
Lus10001809.g Linum usitatissimum Lus10001809.g I 0.000
Lus10002581.g Linum usitatissimum Lus10002581.g I 0.000
MDP0000126517 Malus domestica MDP0000126517 I 0.000
MDP0000147080 Malus domestica MDP0000147080 I 0.000
orange1.1g030727m.g Citrus sinensis orange1.1g030727m.g I 0.000
SapurV1A.0173s0020 Salix purpurea SapurV1A.0173s0020 I 0.000
SapurV1A.0453s0210 Salix purpurea SapurV1A.0453s0210 I 0.000
Thhalv10014495m.g Eutrema salsugineum Thhalv10014495m.g I 0.000
Thhalv10017152m.g Eutrema salsugineum Thhalv10017152m.g I 0.000
PK12461.1 Cannabis sativa PK12461.1 I 0.000
NAC041 Arabidopsis thaliana AT2G33480 I 0.000
Pm007070 Prunus mume Pm007070 I 0.000
Bo2g011120 Brassica oleracea Bo2g011120 I 0.000
Bo3g009040 Brassica oleracea Bo3g009040 I 0.000
Bo4g043670 Brassica oleracea Bo4g043670 I 0.000
Bo4g181990 Brassica oleracea Bo4g181990 I 0.000
Bo9g168950 Brassica oleracea Bo9g168950 I 0.000
Bra005492 Brassica rapa Bra005492 I 0.000
Bra006186 Brassica rapa Bra006186 I 0.000
Bra008849 Brassica rapa Bra008849 I 0.000
Bra021856 Brassica rapa Bra021856 I 0.000
Bra023395 Brassica rapa Bra023395 I 0.000
ANAC041 Arabidopsis lyrata fgenesh2_kg.4__1354__AT2G33480.1 I 0.000
GLYMA08G47520 Glycine max GLYMA08G47520 I 0.000
GLYMA18G53954 Glycine max GLYMA18G53954 I 0.000
MTR_7g005280 Medicago truncatula MTR_7g005280 I 0.000
POPTR_0001s13380 Populus trichocarpa POPTR_0001s13380 I 0.000
POPTR_0003s16490 Populus trichocarpa POPTR_0003s16490 I 0.000
PRUPE_ppa010222mg Prunus persica PRUPE_ppa010222mg I 0.000
ANAC083 Arabidopsis lyrata scaffold_601328.1 I 0.000
TCM_008477 Theobroma cacao TCM_008477 I 0.000
TCM_014713 Theobroma cacao TCM_014713 I 0.000
ANAC083 Vitis vinifera VIT_01s0146g00280 I 0.000
Cla001517 Citrullus lanatus Cla001517 I 0.000
30128.m009035 Ricinus communis 30128.m009035 I 0.000
GSMUA_Achr10G11910_001 Musa acuminata GSMUA_Achr10G11910_001 N 0.000
GSMUA_Achr6G16560_001 Musa acuminata GSMUA_Achr6G16560_001 N 0.000
Carubv10023833m.g Capsella rubella Carubv10023833m.g N 0.000
Cagra.0301s0034 Capsella grandiflora Cagra.0301s0034 N 0.000