CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.4.1148.1
(
Mucor circinelloides
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
gw1.4.1148.1
T227626_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
YHP1
M02191_2.00
Saccharomyces cerevisiae
NWWATKRNN
NNYMATWWN
PBM
Weirauch et al.(2014)
pTH6381
0.651
0.429
YHP1
M08423_2.00
Saccharomyces cerevisiae
TAATTG
CAATTA
ChIP-chip
Mathelier et al.(2014)
MA0426.1
0.651
0.429
YHP1
M08573_2.00
Saccharomyces cerevisiae
WNTAATTR
YAATTANW
Misc
DeBoer et al.(2011)
YDR451C_716
0.651
0.429
YHP1
M10797_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$YHP1_01
0.651
0.429
YOX1
M00058_2.00
Saccharomyces cerevisiae
HTWAATTR
YAATTWAD
PBM
Badis et al.(2008)
YOX1_2073
0.636
0.429
YOX1
M01552_2.00
Saccharomyces cerevisiae
BWWATDR
YHATWWV
PBM
Zhu et al.(2009)
Yox1
0.636
0.429
YOX1
M07487_2.00
Saccharomyces cerevisiae
YTAATTWN
NWAATTAR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1
0.636
0.429
YOX1
M08575_2.00
Saccharomyces cerevisiae
YTAATTWN
NWAATTAR
Misc
DeBoer et al.(2011)
YML027W_498
0.636
0.429
yox1
M02174_2.00
Schizosaccharomyces pombe
NNHHATDDNN
NNHHATDDNN
PBM
Weirauch et al.(2014)
pTH6057
0.628
0.464
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.4.1148.1
Homeodomain
1
56
KMKRRRATVSQTQALQRVFDTTAFPSTGLRENLARHLGMPPRTVQIWFQNKRQAAR
Links
Other
Homeodomain
family TFs
Other
Mucor circinelloides
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
yox1
Schizosaccharomyces pombe
SPBC21B10.13c
D
0.628
YHP1
Saccharomyces cerevisiae
YDR451C
D
0.651
YOX1
Saccharomyces cerevisiae
YML027W
D
0.636
ZBAI_09382
Zygosaccharomyces bailii
ZBAI_09382
I
0.626
SU7_2763
Saccharomyces arboricola
SU7_2763
I
0.650
TBLA_0D01390
Tetrapisispora blattae
TBLA_0D01390
I
0.655
TDEL_0A04320
Torulaspora delbrueckii
TDEL_0A04320
I
0.636
TPHA_0D02630
Tetrapisispora phaffii
TPHA_0D02630
I
0.621
TPHA_0K00360
Tetrapisispora phaffii
TPHA_0K00360
I
0.622
YALI0_E15510g
Yarrowia lipolytica
YALI0_E15510g
I
0.656
ZBAI_03698
Zygosaccharomyces bailii
ZBAI_03698
I
0.626
SU7_2475
Saccharomyces arboricola
SU7_2475
I
0.636
ZYRO0D13596g
Zygosaccharomyces rouxii
ZYRO0D13596g
I
0.625
fgeneshMC_pg.10_#_259
Mucor circinelloides
fgeneshMC_pg.10_#_259
I
0.713
fgeneshPB_pg.5__518
Phycomyces blakesleeanus
fgeneshPB_pg.5__518
I
0.712
gw1.54.52.1
Phycomyces blakesleeanus
gw1.54.52.1
I
0.712
PredSwiss_CON591.1
Pneumocystis carinii
PredSwiss_CON591.1
I
0.646
17440_YML027W
Saccharomyces paradoxus
17440_YML027W
I
0.636
5231_YDR451C
Saccharomyces mikatae
5231_YDR451C
I
0.651
5532_YDR451C
Saccharomyces bayanus
5532_YDR451C
I
0.651
5594_YDR451C
Saccharomyces paradoxus
5594_YDR451C
I
0.651
Kpol_1023p80
Vanderwaltozyma polyspora
Kpol_1023p80
I
0.634
PGUG_00382
Candida guilliermondii
PGUG_00382
I
0.631
RO3G_03673
Rhizopus oryzae
RO3G_03673
I
0.713
SPPG_01917
Spizellomyces punctatus
SPPG_01917
I
0.648
BOTBODRAFT_25870
Botryobasidium botryosum
BOTBODRAFT_25870
I
0.642
CAGL0G07249g
Candida glabrata
CAGL0G07249g
I
0.618
CORT_0H00310
Candida orthopsilosis
CORT_0H00310
I
0.631
JL09_g4323
Pichia kudriavzevii
JL09_g4323
I
0.621
KAFR_0C05600
Kazachstania africana
KAFR_0C05600
I
0.637
Kpol_1004p50
Vanderwaltozyma polyspora
Kpol_1004p50
I
0.630
CPAG_00635
Candida parapsilosis
CPAG_00635
I
0.631
M407DRAFT_21315
Tulasnella calospora
M407DRAFT_21315
I
0.668
PGUG_00382
Meyerozyma guilliermondii
PGUG_00382
I
0.631
PIIN_05295
Piriformospora indica
PIIN_05295
I
0.612
PNEG_03146
Pneumocystis murina
PNEG_03146
I
0.646
SJAG_01157
Schizosaccharomyces japonicus
SJAG_01157
I
0.621
SKUD_123402
Saccharomyces kudriavzevii
SKUD_123402
I
0.651
SOCG_04925
Schizosaccharomyces octosporus
SOCG_04925
I
0.628
SPOG_04875
Schizosaccharomyces cryophilus
SPOG_04875
I
0.628