CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf006635m
(
Mimulus guttatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
mgf006635m
T227694_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RLT1
M02038_2.00
Arabidopsis thaliana
NDHTCWWN
NWWGADHN
PBM
Weirauch et al.(2014)
pTH5432
0.809
0.789
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf006635m
Homeodomain
28
84
RPKRQMKTPFQLEVLEKAYATDMYPSEAARAVLSKKLDLTDRQLQMWFCHRRLKNKK
Links
Other
Homeodomain
family TFs
Other
Mimulus guttatus
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AOL_s00004g388
Arthrobotrys oligospora
AOL_s00004g388
N
FIBRA_03825
Fibroporia radiculosa
FIBRA_03825
N
GLOTRDRAFT_113860
Gloeophyllum trabeum
GLOTRDRAFT_113860
N
H072_4042
Dactylellina haptotyla
H072_4042
N
HETIRDRAFT_312828
Heterobasidion irregulare
HETIRDRAFT_312828
N
Moror_16629
Moniliophthora roreri
Moror_16629
N
PAXINDRAFT_94296
Paxillus involutus
PAXINDRAFT_94296
N
PAXRUDRAFT_35597
Paxillus rubicundulus
PAXRUDRAFT_35597
N
PNEG_02464
Pneumocystis murina
PNEG_02464
N