CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
mgf008059m
(
Mimulus guttatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
mgf008059m
T227699_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KNAT4
M01238_2.00
Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN
PBM
Lambert et al.(2019)
pTH9968
0.855
0.896
KNAT3
M02051_2.00
Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN
PBM
Weirauch et al.(2014)
pTH7600
0.855
0.896
KNAT7
M01064_2.00
Arabidopsis thaliana
TGACRKST
ASMYGTCA
PBM
Sullivan et al.(2014)
pTH9798
0.849
0.917
HOS66
M02156_2.00
Oryza sativa
NNNNDHNN
NNDHNNNN
PBM
Weirauch et al.(2014)
pTH8332
0.818
0.917
Q5EVH4_OIKDI
M02227_2.00
Oikopleura dioica
NTGACAKN
NMTGTCAN
PBM
Weirauch et al.(2014)
pTH6041
0.733
0.500
MEIS3
M03093_2.00
Homo sapiens
DTGACANN
NNTGTCAH
SELEX
Jolma et al.(2013)
MEIS3_1
0.663
0.417
MEIS3
M03094_2.00
Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Jolma et al.(2013)
MEIS3_2
0.663
0.417
MEIS3
M04951_2.00
Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA
SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX
0.663
0.417
MEIS3
M04952_2.00
Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR
SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX
0.663
0.417
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf008059m
Homeodomain
225
275
GDTTSVLKDWWQQHSKWPYPTEDDKAKLVEQTGLQLKQINNWFINQRKRNW
Links
Other
Homeodomain
family TFs
Other
Mimulus guttatus
TFs
1121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DNMT1
Homo sapiens
ENSG00000130816
D
0.000
DNMT1
Sus scrofa
ENSSSCG00000013659
I
0.000
HelroG116156
Helobdella robusta
HelroG116156
I
0.000
GB48403
Apis mellifera
GB48403
I
0.000
GB47348
Apis mellifera
GB47348
I
0.000
ENSXMAG00000018063
Xiphophorus maculatus
ENSXMAG00000018063
I
0.000
DNMT1
Vicugna pacos
ENSVPAG00000006117
I
0.000
dnmt1
Takifugu rubripes
ENSTRUG00000008132
I
0.000
dnmt1
Tetraodon nigroviridis
ENSTNIG00000018567
I
0.000
ENSTGUG00000013708
Taeniopygia guttata
ENSTGUG00000013708
I
0.000
ENSSTOG00000010841
Ictidomys tridecemlineatus
ENSSTOG00000010841
I
0.000
ENSPANG00000001264
Papio anubis
ENSPANG00000001264
I
0.000
ENSSHAG00000008894
Sarcophilus harrisii
ENSSHAG00000008894
I
0.000
Dnmt1
Rattus norvegicus
ENSRNOG00000039859
I
0.000
DNMT1
Pteropus vampyrus
ENSPVAG00000003676
I
0.000
DNMT1
Pan troglodytes
ENSPTRG00000010461
I
0.000
ENSPSIG00000002916
Pelodiscus sinensis
ENSPSIG00000002916
I
0.000
ENSPPYG00000009545
Pongo abelii
ENSPPYG00000009545
I
0.000
ENSPMAG00000002148
Petromyzon marinus
ENSPMAG00000002148
I
0.000
ENSPFOG00000005624
Poecilia formosa
ENSPFOG00000005624
I
0.000
DNMT1
Procavia capensis
ENSPCAG00000011023
I
0.000
dnmt1
Oryzias latipes
ENSORLG00000005582
I
0.000
ENSP00000352516
Macaca fascicularis
ENSP00000352516
I
0.000
XP_002155714.1
Hydra magnipapillata
XP_002155714.1
I
0.000
dnmt1.L
Xenopus laevis
XB-GENE-965566
I
0.000
dnmt1
Xenopus tropicalis
XB-GENE-965562
I
0.000
dnmt1.S
Xenopus laevis
XB-GENE-17332488
I
0.000
Sakowv30005306m.g
Saccoglossus kowalevskii
Sakowv30005306m.g
I
0.000
Ocbimv22034501m.g
Octopus bimaculoides
Ocbimv22034501m.g
I
0.000
Pvit_03471
Pogona vitticeps
Pvit_03471
I
0.000
Ogr12994
Ophisaurus gracilis
Ogr12994
I
0.000
Myotis_brandtii_DNMT1_10007965
Myotis brandtii
Myotis_brandtii_DNMT1_10007965
I
0.000
Gfo_R002685
Geospiza fortis
Gfo_R002685
I
0.000
LotgiG171288
Lottia gigantea
LotgiG171288
I
0.000
ENSP00000352516-D1
Bos grunniens
ENSP00000352516-D1
I
0.000
Cmyd_10002310
Chelonia mydas
Cmyd_10002310
I
0.000
Cflo_12808--XP_001122269.1_APIME
Camponotus floridanus
Cflo_12808--XP_001122269.1_APIME
I
0.000
Brh_R005100
Buceros rhinoceros
Brh_R005100
I
0.000
Alligator_sinensis_CCG017947.1
Alligator sinensis
Alligator_sinensis_CCG017947.1
I
0.000
Afo_R010037
Aptenodytes forsteri
Afo_R010037
I
0.000
Aan_R006371
Calypte anna
Aan_R006371
I
0.000
NV11649
Nasonia vitripennis
NV11649
I
0.000
NEMVEDRAFT_v1g125496
Nematostella vectensis
NEMVEDRAFT_v1g125496
I
0.000
DNMT1
Choloepus hoffmanni
ENSCHOG00000009490
I
0.000
DNMT1
Felis catus
ENSFCAG00000012246
I
0.000
ENSFALG00000007760
Ficedula albicollis
ENSFALG00000007760
I
0.000
DNMT1
Echinops telfairi
ENSETEG00000012574
I
0.000
DNMT1
Equus caballus
ENSECAG00000026909
I
0.000
Dnmt1
Dipodomys ordii
ENSDORG00000014116
I
0.000
DNMT1
Dasypus novemcinctus
ENSDNOG00000003313
I
0.000
dnmt1
Danio rerio
ENSDARG00000030756
I
0.000
ENSCSAG00000007378
Chlorocebus sabaeus
ENSCSAG00000007378
I
0.000
DNMT1
Cavia porcellus
ENSCPOG00000019557
I
0.000
DNMT1
Callithrix jacchus
ENSCJAG00000005794
I
0.000
dnmt1
Gasterosteus aculeatus
ENSGACG00000013741
I
0.000
DNMT1
Canis familiaris
ENSCAFG00000017892
I
0.000
DNMT1
Bos taurus
ENSBTAG00000002736
I
0.000
ENSAMXG00000012182
Astyanax mexicanus
ENSAMXG00000012182
I
0.000
ENSAMEG00000011823
Ailuropoda melanoleuca
ENSAMEG00000011823
I
0.000
DNMT1
Anolis carolinensis
ENSACAG00000003948
I
0.000
CGI_10021920
Crassostrea gigas
CGI_10021920
I
0.000
CapteG160905
Capitella teleta
CapteG160905
I
0.000
Aqu1.224590
Amphimedon queenslandica
Aqu1.224590
I
0.000
Aqu1.204705
Amphimedon queenslandica
Aqu1.204705
I
0.000
DNMT1
Monodelphis domestica
ENSMODG00000005463
I
0.000
DNMT1
Ochotona princeps
ENSOPRG00000007032
I
0.000
ENSONIG00000001574
Oreochromis niloticus
ENSONIG00000001574
I
0.000
DNMT1
Otolemur garnettii
ENSOGAG00000001265
I
0.000
ENSOCUG00000008415
Oryctolagus cuniculus
ENSOCUG00000008415
I
0.000
ENSOARG00000015380
Ovis aries
ENSOARG00000015380
I
0.000
ENSOANG00000012255
Ornithorhynchus anatinus
ENSOANG00000012255
I
0.000
ENSNLEG00000012092
Nomascus leucogenys
ENSNLEG00000012092
I
0.000
Dnmt1
Mus musculus
ENSMUSG00000004099
I
0.000
ENSMPUG00000006829
Mustela putorius furo
ENSMPUG00000006829
I
0.000
Aqu1.203581
Amphimedon queenslandica
Aqu1.203581
I
0.000
DNMT1
Macaca mulatta
ENSMMUG00000014604
I
0.000
DNMT1
Myotis lucifugus
ENSMLUG00000001347
I
0.000
DNMT1
Microcebus murinus
ENSMICG00000010231
I
0.000
ENSMEUG00000012650
Macropus eugenii
ENSMEUG00000012650
I
0.000
ENSLOCG00000007421
Lepisosteus oculatus
ENSLOCG00000007421
I
0.000
DNMT1
Loxodonta africana
ENSLAFG00000002818
I
0.000
ENSGMOG00000003491
Gadus morhua
ENSGMOG00000003491
I
0.000
DNMT1
Gorilla gorilla
ENSGGOG00000016574
I
0.000
ENSGALG00000028997
Gallus gallus
ENSGALG00000028997
I
0.000