CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK13272.1
(
Cannabis sativa
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
PK13272.1
T230094_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RLT1
M02038_2.00
Arabidopsis thaliana
NDHTCWWN
NWWGADHN
PBM
Weirauch et al.(2014)
pTH5432
0.855
0.842
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK13272.1
Homeodomain
34
90
KPKRQMKTPFQLETLEKAYALEAYPSETIRAELSKKLALTDRQLQMWFCHRRLKDKK
Links
Other
Homeodomain
family TFs
Other
Cannabis sativa
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FFUJ_02866
Fusarium fujikuroi
FFUJ_02866
N
0.000
FVEG_08195
Fusarium verticillioides
FVEG_08195
N
0.000
HPODL_04843
Ogataea parapolymorpha
HPODL_04843
N
0.000
PV09_04421
Verruconis gallopava
PV09_04421
N
0.000
TRIVIDRAFT_217692
Trichoderma virens
TRIVIDRAFT_217692
N
0.000