Sjc_0112890 (Schistosoma japonicum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Sjc_0112890 T230199_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.784 0.600
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.784 0.600
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.784 0.600
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.784 0.600
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.721 0.575
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.648 0.450
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.645 0.475
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.645 0.475
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.638 0.500
HOS66
M02156_2.00 		Oryza sativa
NNNNDHNN
NNDHNNNN		 PBM
Weirauch et al.(2014)
pTH8332 		0.632 0.450
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000010619 Homeodomain 140 179

Links

Other Homeodomain family TFs
Other Schistosoma japonicum TFs

1253 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCHCODRAFT_258883 Schizophyllum commune SCHCODRAFT_258883 D
PAXRUDRAFT_833407 Paxillus rubicundulus PAXRUDRAFT_833407 I
fgenesh2_pg.C_scaffold_1000086 Heterobasidion annosum fgenesh2_pg.C_scaffold_1000086 I
SERLA73DRAFT_115823 Serpula lacrymans SERLA73DRAFT_115823 I
POSPLDRAFT_106184 Postia placenta POSPLDRAFT_106184 I
BN946_scf184576.g4 Trametes cinnabarina BN946_scf184576.g4 I
PAXINDRAFT_83471 Paxillus involutus PAXINDRAFT_83471 I
GLOTRDRAFT_30797 Gloeophyllum trabeum GLOTRDRAFT_30797 I
FOMPIDRAFT_1133812 Fomitopsis pinicola FOMPIDRAFT_1133812 I
CERSUDRAFT_79927 Ceriporiopsis subvermispora CERSUDRAFT_79927 I
M378DRAFT_80917 Amanita muscaria M378DRAFT_80917 N
LACBIDRAFT_308011 Laccaria bicolor LACBIDRAFT_308011 N
K443DRAFT_97730 Laccaria amethystina K443DRAFT_97730 N
PILCRDRAFT_254451 Piloderma croceum PILCRDRAFT_254451 N
PLEOSDRAFT_1089905 Pleurotus ostreatus PLEOSDRAFT_1089905 N
GALMADRAFT_271364 Galerina marginata GALMADRAFT_271364 N
SCLCIDRAFT_125598 Scleroderma citrinum SCLCIDRAFT_125598 N
SERLA73DRAFT_143290 Serpula lacrymans SERLA73DRAFT_143290 N