CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PAXRUDRAFT_833407
(
Paxillus rubicundulus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PAXRUDRAFT_833407
T125501_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_258883
M01464_2.00
Schizophyllum commune
NNCCCCTDD
HHAGGGGNN
PBM
Najafabadi et al.(2015a)
pTH10244
0.757
0.739
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIK80641
C2H2 ZF
260
285
YTCHAHGCGKCFVRGEHLKRHIRSIH
KIK80641
C2H2 ZF
291
315
WKCTHAGCSRTFSRRDNLNQHLRIH
Links
Other
C2H2 ZF
family TFs
Other
Paxillus rubicundulus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PAXINDRAFT_83471
Paxillus involutus
PAXINDRAFT_83471
I
0.827
GYMLUDRAFT_181158
Gymnopus luxurians
GYMLUDRAFT_181158
I
0.772
CY34DRAFT_87735
Suillus luteus
CY34DRAFT_87735
N
0.768
SERLA73DRAFT_143290
Serpula lacrymans
SERLA73DRAFT_143290
N
0.767
SCLCIDRAFT_125598
Scleroderma citrinum
SCLCIDRAFT_125598
N
0.758
SCHCODRAFT_258883
Schizophyllum commune
SCHCODRAFT_258883
D
0.757