BXY_0883500 (Bursaphelenchus xylophilus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 BXY_0883500 T233281_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pou1f1
M02238_2.00 		Mus musculus
NTAATKHNN
NNDMATTAN		 PBM
Weirauch et al.(2014)
pTH6507 		0.737 0.632
acj6
M02241_2.00 		Drosophila melanogaster
VTMATTAA
TTAATKAB		 PBM
Weirauch et al.(2014)
pTH6053 		0.719 0.509
POU6F1
M02094_2.00 		Homo sapiens
VNTAATTANB
VNTAATTANB		 PBM
Weirauch et al.(2014)
pTH6519 		0.625 0.544
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BXY_0883500.1 Homeodomain 18 74

Links

Other Homeodomain family TFs
Other Bursaphelenchus xylophilus TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10028470.g Linum usitatissimum Lus10028470.g N 0.000
Aquca_026_00293 Aquilegia coerulea Aquca_026_00293 N 0.000
Bostr.26959s0040 Boechera stricta Bostr.26959s0040 N 0.000
Cagra.3364s0006 Capsella grandiflora Cagra.3364s0006 N 0.000
Carubv10022391m.g Capsella rubella Carubv10022391m.g N 0.000
Ciclev10016422m.g Citrus clementina Ciclev10016422m.g N 0.000
Ciclev10022068m.g Citrus clementina Ciclev10022068m.g N 0.000
Eucgr.G02321 Eucalyptus grandis Eucgr.G02321 N 0.000
Eucgr.J01501 Eucalyptus grandis Eucgr.J01501 N 0.000
Eucgr.K02222 Eucalyptus grandis Eucgr.K02222 N 0.000
evm.TU.supercontig_282.15 Carica papaya evm.TU.supercontig_282.15 N 0.000
gene03741-v1.0-hybrid Fragaria vesca gene03741-v1.0-hybrid N 0.000
Gorai.008G056000 Gossypium raimondii Gorai.008G056000 N 0.000
Cucsa.031350 Cucumis sativus Cucsa.031350 N 0.000
MDP0000131978 Malus domestica MDP0000131978 N 0.000
MDP0000136037 Malus domestica MDP0000136037 N 0.000
MDP0000233303 Malus domestica MDP0000233303 N 0.000
MDP0000881409 Malus domestica MDP0000881409 N 0.000
orange1.1g038007m.g Citrus sinensis orange1.1g038007m.g N 0.000
orange1.1g045357m.g Citrus sinensis orange1.1g045357m.g N 0.000
SapurV1A.0079s0150 Salix purpurea SapurV1A.0079s0150 N 0.000
SapurV1A.0315s0090 Salix purpurea SapurV1A.0315s0090 N 0.000
SapurV1A.0851s0010 Salix purpurea SapurV1A.0851s0010 N 0.000
PK03169.1 Cannabis sativa PK03169.1 N 0.000
chr1.LjT23D08.90.nc Lotus japonicus chr1.LjT23D08.90.nc N 0.000
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N 0.000
LBD42 Arabidopsis thaliana AT1G68510 N 0.000
Bo6g106960 Brassica oleracea Bo6g106960 N 0.000
Bra004315 Brassica rapa Bra004315 N 0.000
LBD42 Arabidopsis lyrata fgenesh2_kg.2__1100__AT1G68510.1 N 0.000
GLYMA13G07590 Glycine max GLYMA13G07590 N 0.000
GSMUA_Achr3G29520_001 Musa acuminata GSMUA_Achr3G29520_001 N 0.000
GSMUA_Achr4G06820_001 Musa acuminata GSMUA_Achr4G06820_001 N 0.000
GSMUA_Achr4G13790_001 Musa acuminata GSMUA_Achr4G13790_001 N 0.000
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N 0.000
MTR_6g018270 Medicago truncatula MTR_6g018270 N 0.000
MTR_7g007010 Medicago truncatula MTR_7g007010 N 0.000
AMTR_s00079p00088960 Amborella trichopoda AMTR_s00079p00088960 N 0.000
POPTR_0005s15670 Populus trichocarpa POPTR_0005s15670 N 0.000
POPTR_0008s11950 Populus trichocarpa POPTR_0008s11950 N 0.000
POPTR_0010s13480 Populus trichocarpa POPTR_0010s13480 N 0.000
PRUPE_ppa009213mg Prunus persica PRUPE_ppa009213mg N 0.000
PRUPE_ppa011233mg Prunus persica PRUPE_ppa011233mg N 0.000
TCM_012338 Theobroma cacao TCM_012338 N 0.000
TCM_019459 Theobroma cacao TCM_019459 N 0.000
VIT_14s0006g02950 Vitis vinifera VIT_14s0006g02950 N 0.000
Cla007208 Citrullus lanatus Cla007208 N 0.000
Pm029059 Prunus mume Pm029059 N 0.000
cassava6185.valid.m1 Manihot esculenta cassava6185.valid.m1 N 0.000