CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BXY_0883500
(
Bursaphelenchus xylophilus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
BXY_0883500
T233281_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Pou1f1
M02238_2.00
Mus musculus
NTAATKHNN
NNDMATTAN
PBM
Weirauch et al.(2014)
pTH6507
0.737
0.632
acj6
M02241_2.00
Drosophila melanogaster
VTMATTAA
TTAATKAB
PBM
Weirauch et al.(2014)
pTH6053
0.719
0.509
POU6F1
M02094_2.00
Homo sapiens
VNTAATTANB
VNTAATTANB
PBM
Weirauch et al.(2014)
pTH6519
0.625
0.544
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BXY_0883500.1
Homeodomain
18
74
RKKRTSIEVQIKSRLEFHFQKNPKPNAQEITSVANDLQLEKEVVRVWFCNRRQKEKR
Links
Other
Homeodomain
family TFs
Other
Bursaphelenchus xylophilus
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HelroG138303
Helobdella robusta
HelroG138303
I
0.835
ENSSHAG00000018562
Sarcophilus harrisii
ENSSHAG00000018562
I
0.758
AMAM021613
Anopheles maculatus
AMAM021613
I
0.752
AMAM009961
Anopheles maculatus
AMAM009961
I
0.746
POU2F2
Homo sapiens
ENSG00000028277
D
0.746
ENSCSAVG00000007148
Ciona savignyi
ENSCSAVG00000007148
I
0.737
SBAD_0000673901
Soboliphyme baturini
SBAD_0000673901
I
0.733
MESCA009897
Megaselia scalaris
MESCA009897
I
0.724
ENSCING00000013609
Ciona intestinalis
ENSCING00000013609
I
0.721
L798_02028
Zootermopsis nevadensis
L798_02028
I
0.719
Cflo_05860--XP_394134.2_APIME
Camponotus floridanus
Cflo_05860--XP_394134.2_APIME
I
0.719
Cmyd_10006628
Chelonia mydas
Cmyd_10006628
I
0.719
Ogr05710
Ophisaurus gracilis
Ogr05710
I
0.719
PPAI004106
Phlebotomus papatasi
PPAI004106
I
0.719
L898_g18190
Steinernema monticolum
L898_g18190
I
0.719
acj6
Drosophila melanogaster
FBgn0000028
D
0.719
BGIBMGA010300
Bombyx mori
BGIBMGA010300
I
0.713
ENSOANG00000013329
Ornithorhynchus anatinus
ENSOANG00000013329
I
0.691
DAPPUDRAFT_9350
Daphnia pulex
DAPPUDRAFT_9350
I
0.688
DAPPUDRAFT_9412
Daphnia pulex
DAPPUDRAFT_9412
N
0.671
EFV49290
Trichinella spiralis
EFV49290
I
0.654
L596_g13343
Steinernema carpocapsae
L596_g13343
I
0.649
GPUH_0000951201
Gongylonema pulchrum
GPUH_0000951201
I
0.647
POU6F1
Homo sapiens
ENSG00000184271
D
0.625
SPER_0000448001
Spirometra erinaceieuropaei
SPER_0000448001
I
0.602