L596_g13343 (Steinernema carpocapsae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 L596_g13343 T234499_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
acj6
M02241_2.00 		Drosophila melanogaster
VTMATTAA
TTAATKAB		 PBM
Weirauch et al.(2014)
pTH6053 		0.649 0.456
POU6F1
M02094_2.00 		Homo sapiens
VNTAATTANB
VNTAATTANB		 PBM
Weirauch et al.(2014)
pTH6519 		0.599 0.474
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g13343.t1 Homeodomain 27 83

Links

Other Homeodomain family TFs
Other Steinernema carpocapsae TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GPUH_0000951201 Gongylonema pulchrum GPUH_0000951201 I 0.828
SBAD_0000673901 Soboliphyme baturini SBAD_0000673901 I 0.733
MESCA009897 Megaselia scalaris MESCA009897 I 0.696
ENSOANG00000013329 Ornithorhynchus anatinus ENSOANG00000013329 I 0.694
AMAM009961 Anopheles maculatus AMAM009961 I 0.682
EFV49290 Trichinella spiralis EFV49290 I 0.681
BGIBMGA010300 Bombyx mori BGIBMGA010300 I 0.677
ENSSHAG00000018562 Sarcophilus harrisii ENSSHAG00000018562 I 0.672
POU2F2 Homo sapiens ENSG00000028277 D 0.672
ENSCING00000013609 Ciona intestinalis ENSCING00000013609 I 0.668
ENSCSAVG00000007148 Ciona savignyi ENSCSAVG00000007148 I 0.668
HelroG138303 Helobdella robusta HelroG138303 I 0.661
L798_02028 Zootermopsis nevadensis L798_02028 I 0.649
Cflo_05860--XP_394134.2_APIME Camponotus floridanus Cflo_05860--XP_394134.2_APIME I 0.649
Cmyd_10006628 Chelonia mydas Cmyd_10006628 I 0.649
BXY_0883500 Bursaphelenchus xylophilus BXY_0883500 I 0.649
acj6 Drosophila melanogaster FBgn0000028 D 0.649
Ogr05710 Ophisaurus gracilis Ogr05710 I 0.645
L898_g18190 Steinernema monticolum L898_g18190 I 0.645
DAPPUDRAFT_9350 Daphnia pulex DAPPUDRAFT_9350 I 0.640
ECPE_0001547101 Echinostoma caproni ECPE_0001547101 N 0.640
AMAM021613 Anopheles maculatus AMAM021613 I 0.617
PPAI004106 Phlebotomus papatasi PPAI004106 I 0.617
POU5F1 Callithrix jacchus ENSCJAG00000019789 I 0.617
SMTD_0002076601 Schistosoma mattheei SMTD_0002076601 I 0.613
SROB_0001854701 Schistosoma rodhaini SROB_0001854701 I 0.613
POU6F1 Homo sapiens ENSG00000184271 D 0.599