SROB_0001854701 (Schistosoma rodhaini)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SROB_0001854701 T236425_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pdm3
M02127_2.00 		Drosophila melanogaster
CTAATTAN
NTAATTAG		 PBM
Weirauch et al.(2014)
pTH6769 		0.631 0.482
POU6F1
M02094_2.00 		Homo sapiens
VNTAATTANB
VNTAATTANB		 PBM
Weirauch et al.(2014)
pTH6519 		0.603 0.482
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0001854701-mRNA-1 Homeodomain 40 95

Links

Other Homeodomain family TFs
Other Schistosoma rodhaini TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMTD_0002076601 Schistosoma mattheei SMTD_0002076601 I 0.867
ECPE_0001547101 Echinostoma caproni ECPE_0001547101 N 0.693
SPER_0000448001 Spirometra erinaceieuropaei SPER_0000448001 I 0.658
ACYPI27690 Acyrthosiphon pisum ACYPI27690 I 0.643
CpipJ_CPIJ003414 Culex pipiens CpipJ_CPIJ003414 I 0.631
BGIBMGA005254 Bombyx mori BGIBMGA005254 I 0.631
CPIJ003414 Culex quinquefasciatus CPIJ003414 I 0.631
pdm3 Drosophila melanogaster FBgn0261588 D 0.631
ACUA020432 Anopheles culicifacies ACUA020432 I 0.631
L596_g13343 Steinernema carpocapsae L596_g13343 I 0.613
GPUH_0000951201 Gongylonema pulchrum GPUH_0000951201 I 0.610
POU6F1 Homo sapiens ENSG00000184271 D 0.603