CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIBMGA005254
(
Bombyx mori
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
BGIBMGA005254
T204604_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pdm3
M02127_2.00
Drosophila melanogaster
CTAATTAN
NTAATTAG
PBM
Weirauch et al.(2014)
pTH6769
0.867
1.000
POU6F1
M02094_2.00
Homo sapiens
VNTAATTANB
VNTAATTANB
PBM
Weirauch et al.(2014)
pTH6519
0.703
0.684
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIBMGA005254-TA
Homeodomain
7
63
RKRRTSFTPQALELLNAHFERNTHPSGTEITGLAHQLGYEREVIRIWFCNKRQALKN
Links
Other
Homeodomain
family TFs
Other
Bombyx mori
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CpipJ_CPIJ003414
Culex pipiens
CpipJ_CPIJ003414
I
0.867
CPIJ003414
Culex quinquefasciatus
CPIJ003414
I
0.867
pdm3
Drosophila melanogaster
FBgn0261588
D
0.867
ACUA020432
Anopheles culicifacies
ACUA020432
I
0.867
ACYPI27690
Acyrthosiphon pisum
ACYPI27690
I
0.855
POU6F1
Homo sapiens
ENSG00000184271
D
0.703
SPER_0000448001
Spirometra erinaceieuropaei
SPER_0000448001
I
0.640
SMTD_0002076601
Schistosoma mattheei
SMTD_0002076601
I
0.631
SROB_0001854701
Schistosoma rodhaini
SROB_0001854701
I
0.631
MESCA009897
Megaselia scalaris
MESCA009897
I
0.623
SBAD_0000673901
Soboliphyme baturini
SBAD_0000673901
I
0.605
ENSSHAG00000018562
Sarcophilus harrisii
ENSSHAG00000018562
I
0.600
POU2F2
Homo sapiens
ENSG00000028277
D
0.600