TTAC_0000818201 (Hydatigera taeniaeformis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 TTAC_0000818201 T237134_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.809 0.893
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.797 0.893
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.775 0.875
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.775 0.875
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.775 0.875
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.767 0.839
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.767 0.839
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.767 0.839
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.755 0.821
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.755 0.821
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.755 0.821
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.755 0.821
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.755 0.821
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.755 0.821
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TTAC_0000818201-mRNA-1 Homeodomain 201 259

Links

Other Homeodomain family TFs
Other Hydatigera taeniaeformis TFs

381 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TGA6 Arabidopsis thaliana AT3G12250 D
TGA2 Arabidopsis thaliana AT5G06950 D
TGA5 Arabidopsis thaliana AT5G06960 D
HBP1B_WHEAT Triticum aestivum HBP1B_WHEAT D
PK09021.1 Cannabis sativa PK09021.1 D
BGIOSGA000624 Oryza indica BGIOSGA000624 I
BGIOSGA003265 Oryza indica BGIOSGA003265 I
Bo1g139470 Brassica oleracea Bo1g139470 I
Bo2g007460 Brassica oleracea Bo2g007460 I
Bo3g064830 Brassica oleracea Bo3g064830 I
Bo5g133550 Brassica oleracea Bo5g133550 I
Bo9g175710 Brassica oleracea Bo9g175710 I
Bra001443 Brassica rapa Bra001443 I
Bra009241 Brassica rapa Bra009241 I
Bra028713 Brassica rapa Bra028713 I
Bra034767 Brassica rapa Bra034767 I
Bra038705 Brassica rapa Bra038705 I
BRADI2G10830 Brachypodium distachyon BRADI2G10830 I
TGA6 Arabidopsis lyrata fgenesh2_kg.3__1288__AT3G12250.4 I
OBF5 Arabidopsis lyrata fgenesh2_kg.6__648__AT5G06960.1 I
GLYMA03G28320 Glycine max GLYMA03G28320 I
GLYMA13G26280 Glycine max GLYMA13G26280 I
GLYMA15G37220 Glycine max GLYMA15G37220 I
GLYMA19G31050 Glycine max GLYMA19G31050 I
GLYMA20G39050 Glycine max GLYMA20G39050 I
GRMZM2G019907 Zea mays GRMZM2G019907 I
GRMZM2G030280 Zea mays GRMZM2G030280 I
GRMZM2G125243 Zea mays GRMZM2G125243 I
GSMUA_Achr10G00340_001 Musa acuminata GSMUA_Achr10G00340_001 I
GSMUA_Achr11G25140_001 Musa acuminata GSMUA_Achr11G25140_001 I
GSMUA_Achr3G11150_001 Musa acuminata GSMUA_Achr3G11150_001 I
GSMUA_Achr3G25020_001 Musa acuminata GSMUA_Achr3G25020_001 I
GSMUA_Achr8G05800_001 Musa acuminata GSMUA_Achr8G05800_001 I
GSMUA_Achr8G21670_001 Musa acuminata GSMUA_Achr8G21670_001 I
LPERR01G10700 Leersia perrieri LPERR01G10700 I
LPERR05G17110 Leersia perrieri LPERR05G17110 I
MTR_7g089800 Medicago truncatula MTR_7g089800 I
MTR_8g040120 Medicago truncatula MTR_8g040120 I
OB01G21470 Oryza brachyantha OB01G21470 I
OB01G43330 Oryza brachyantha OB01G43330 I
OBART01G11380 Oryza barthii OBART01G11380 I
OBART01G34430 Oryza barthii OBART01G34430 I
OBART05G21230 Oryza barthii OBART05G21230 I
OGLUM01G20660 Oryza glumaepatula OGLUM01G20660 I
OGLUM05G22440 Oryza glumaepatula OGLUM05G22440 I
OLONG_003165 Oryza longistaminata OLONG_003165 I
OLONG_020675 Oryza longistaminata OLONG_020675 I
OMERI01G31730 Oryza meridionalis OMERI01G31730 I
ONIVA01G13810 Oryza nivara ONIVA01G13810 I
ONIVA01G39320 Oryza nivara ONIVA01G39320 I
OPUNC01G11270 Oryza punctata OPUNC01G11270 I
OPUNC01G33450 Oryza punctata OPUNC01G33450 I
OPUNC05G18920 Oryza punctata OPUNC05G18920 I
ORUFI01G12420 Oryza rufipogon ORUFI01G12420 I
ORUFI01G37800 Oryza rufipogon ORUFI01G37800 I
TGA2.3 Oryza sativa OS01G0279900 I
OS01G0808100 Oryza sativa OS01G0808100 I
OS05G0492000 Oryza sativa OS05G0492000 I
PGSC0003DMG400009449 Solanum tuberosum PGSC0003DMG400009449 I
POPTR_0001s06700 Populus trichocarpa POPTR_0001s06700 I
POPTR_0006s03720 Populus trichocarpa POPTR_0006s03720 I
POPTR_0006s05770 Populus trichocarpa POPTR_0006s05770 I
PAN Populus trichocarpa POPTR_0008s11710 I
POPTR_0016s03590 Populus trichocarpa POPTR_0016s03590 I
POPTR_0016s04970 Populus trichocarpa POPTR_0016s04970 I
PRUPE_ppa003825mg Prunus persica PRUPE_ppa003825mg I
PRUPE_ppa005279mg Prunus persica PRUPE_ppa005279mg I
Sb03g006790 Sorghum bicolor Sb03g006790 I
Sb03g037560 Sorghum bicolor Sb03g037560 I
Si001292m.g Setaria italica Si001292m.g I
Si002195m.g Setaria italica Si002195m.g I
Solyc11g064950.1 Solanum lycopersicum Solyc11g064950.1 I
TCM_011845 Theobroma cacao TCM_011845 I
TCM_023491 Theobroma cacao TCM_023491 I
TCM_023492 Theobroma cacao TCM_023492 I
TCM_024862 Theobroma cacao TCM_024862 I
TRAES3BF003000030CFD_g Triticum aestivum TRAES3BF003000030CFD_g I
PAN Vitis vinifera VIT_01s0011g03230 I
VIT_08s0007g05170 Vitis vinifera VIT_08s0007g05170 I
TGA10 Vitis vinifera VIT_08s0007g06160 I
VIT_13s0084g00660 Vitis vinifera VIT_13s0084g00660 I
VIT_18s0001g04470 Vitis vinifera VIT_18s0001g04470 I
Ca_07170 Cicer arietinum Ca_07170 I
Ca_10901 Cicer arietinum Ca_10901 I
Ca_17971 Cicer arietinum Ca_17971 I
Cla002918 Citrullus lanatus Cla002918 I
Cla010092 Citrullus lanatus Cla010092 I
Cla017796 Citrullus lanatus Cla017796 I
Cla022393 Citrullus lanatus Cla022393 I
Pm016643 Prunus mume Pm016643 I
Pm025995 Prunus mume Pm025995 I
Pm028917 Prunus mume Pm028917 I
29216.m000249 Ricinus communis 29216.m000249 I
30131.m007163 Ricinus communis 30131.m007163 I
cassava1426.valid.m1 Manihot esculenta cassava1426.valid.m1 I
cassava1427.valid.m1 Manihot esculenta cassava1427.valid.m1 I
cassava22236.valid.m1 Manihot esculenta cassava22236.valid.m1 I
cassava22237.valid.m1 Manihot esculenta cassava22237.valid.m1 I
cassava39253.m1 Manihot esculenta cassava39253.m1 I
cassava39733.m1 Manihot esculenta cassava39733.m1 I
cassava6928.valid.m1 Manihot esculenta cassava6928.valid.m1 I
Cucsa.005120 Cucumis sativus Cucsa.005120 I
Cucsa.242870 Cucumis sativus Cucsa.242870 I
Cucsa.307820 Cucumis sativus Cucsa.307820 I
Cucsa.337740 Cucumis sativus Cucsa.337740 I
mgf005858m Mimulus guttatus mgf005858m I
mgf025345m Mimulus guttatus mgf025345m I
Aquca_004_00791 Aquilegia coerulea Aquca_004_00791 I
Aquca_009_00172 Aquilegia coerulea Aquca_009_00172 I
Aquca_009_00424 Aquilegia coerulea Aquca_009_00424 I
Bostr.13129s0278 Boechera stricta Bostr.13129s0278 I
Bostr.13129s0279 Boechera stricta Bostr.13129s0279 I
Bostr.3640s0002 Boechera stricta Bostr.3640s0002 I
Cagra.0430s0055 Capsella grandiflora Cagra.0430s0055 I
Cagra.16209s0003 Capsella grandiflora Cagra.16209s0003 I
Cagra.16209s0004 Capsella grandiflora Cagra.16209s0004 I
Carubv10001409m.g Capsella rubella Carubv10001409m.g I
Carubv10001413m.g Capsella rubella Carubv10001413m.g I
Ciclev10001081m.g Citrus clementina Ciclev10001081m.g I
Ciclev10005080m.g Citrus clementina Ciclev10005080m.g I
Ciclev10031361m.g Citrus clementina Ciclev10031361m.g I
Eucgr.A02240 Eucalyptus grandis Eucgr.A02240 I
Eucgr.B03855 Eucalyptus grandis Eucgr.B03855 I
Eucgr.G03217 Eucalyptus grandis Eucgr.G03217 I
Eucgr.K01643 Eucalyptus grandis Eucgr.K01643 I
evm.TU.supercontig_1.202 Carica papaya evm.TU.supercontig_1.202 I
evm.TU.supercontig_5.165 Carica papaya evm.TU.supercontig_5.165 I
evm.TU.supercontig_847.1 Carica papaya evm.TU.supercontig_847.1 I
evm.TU.supercontig_85.93 Carica papaya evm.TU.supercontig_85.93 I
gene00517-v1.0-hybrid Fragaria vesca gene00517-v1.0-hybrid I
gene21882-v1.0-hybrid Fragaria vesca gene21882-v1.0-hybrid I
Gorai.001G122100 Gossypium raimondii Gorai.001G122100 I
Gorai.002G228200 Gossypium raimondii Gorai.002G228200 I
Gorai.006G141000 Gossypium raimondii Gorai.006G141000 I
Gorai.007G352600 Gossypium raimondii Gorai.007G352600 I
Gorai.008G185000 Gossypium raimondii Gorai.008G185000 I
Gorai.011G217200 Gossypium raimondii Gorai.011G217200 I
Gorai.013G001700 Gossypium raimondii Gorai.013G001700 I
Gorai.013G081100 Gossypium raimondii Gorai.013G081100 I
Lus10008658.g Linum usitatissimum Lus10008658.g I
Lus10024140.g Linum usitatissimum Lus10024140.g I
Lus10026166.g Linum usitatissimum Lus10026166.g I
MDP0000262210 Malus domestica MDP0000262210 I
MDP0000300532 Malus domestica MDP0000300532 I
MDP0000307943 Malus domestica MDP0000307943 I
MDP0000320322 Malus domestica MDP0000320322 I
MDP0000320524 Malus domestica MDP0000320524 I
MDP0000536881 Malus domestica MDP0000536881 I
orange1.1g015258m.g Citrus sinensis orange1.1g015258m.g I
orange1.1g038233m.g Citrus sinensis orange1.1g038233m.g I
orange1.1g045786m.g Citrus sinensis orange1.1g045786m.g I
Pavir.Eb01160 Panicum virgatum Pavir.Eb01160 I
Pavir.Eb03507 Panicum virgatum Pavir.Eb03507 I
SapurV1A.0018s0400 Salix purpurea SapurV1A.0018s0400 I
SapurV1A.0079s0330 Salix purpurea SapurV1A.0079s0330 I
SapurV1A.0189s0240 Salix purpurea SapurV1A.0189s0240 I
SapurV1A.0196s0260 Salix purpurea SapurV1A.0196s0260 I
SapurV1A.1761s0020 Salix purpurea SapurV1A.1761s0020 I
Thhalv10014082m.g Eutrema salsugineum Thhalv10014082m.g I
Thhalv10021187m.g Eutrema salsugineum Thhalv10021187m.g I
PK13754.1 Cannabis sativa PK13754.1 I
PK21698.1 Cannabis sativa PK21698.1 I
chr1.CM0009.80.nd Lotus japonicus chr1.CM0009.80.nd I
PDK_20s1462851g003 Phoenix dactylifera PDK_20s1462851g003 I
OB05G28710 Oryza brachyantha OB05G28710 N
ORGLA05G0184200 Oryza glaberrima ORGLA05G0184200 N
ORUFI05G22470 Oryza rufipogon ORUFI05G22470 N
Traes_1AS_412B31FC1 Triticum aestivum Traes_1AS_412B31FC1 N
Traes_1BS_E3FCA98E3 Triticum aestivum Traes_1BS_E3FCA98E3 N
Thhalv10015975m.g Eutrema salsugineum Thhalv10015975m.g N