Thaps6935 (Thalassiosira pseudonana)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Thaps6935 T242275_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hsf2
M09231_2.00 		Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A 		0.328 0.301
HSF2
M03324_2.00 		Homo sapiens
GAANVTTCTAGAA
TTCTAGAABNTTC		 SELEX
Jolma et al.(2013)
HSF2_1 		0.326 0.301
HSF2
M02744_2.00 		Homo sapiens
GAABGTTCTRGA
TCYAGAACVTTC		 SELEX
Jolma et al.(2010)
HSF2_dimertrimer 		0.326 0.301
HSF2
M05505_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX 		0.326 0.301
HSF2
M05507_2.00 		Homo sapiens
VGAANNTTCBVGAAN
NTTCBVGAANNTTCB		 SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX 		0.326 0.301
HSF2
M09229_2.00 		Homo sapiens
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A 		0.326 0.301
HSF2
M10859_2.00 		Homo sapiens
VGAANNWTCB
VGAWNNTTCB		 Transfac
Matys et al.(2006)
V$HSF2_01 		0.326 0.301
HSF2
M10860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_02 		0.326 0.301
HSF2
M10861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_Q6 		0.326 0.301
HSF2
M05506_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX 		0.326 0.301
HSF2
M05508_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX 		0.326 0.301
hsf2
M02248_2.00 		Danio rerio
NNNWGTTCTATNN
NNATAGAACWNNN		 PBM
Weirauch et al.(2014)
pTH9010 		0.321 0.312
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps6935 HSF 160 270

Links

Other HSF family TFs
Other Thalassiosira pseudonana TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SALL4 Homo sapiens ENSG00000101115 D 0.000
Sall4 Mus musculus ENSMUSG00000027547 D 0.000
ENSMPUG00000017543 Mustela putorius furo ENSMPUG00000017543 I 0.000
ENSP00000217086 Macaca fascicularis ENSP00000217086 I 0.000
SALL4 Tursiops truncatus ENSTTRG00000007753 I 0.000
ENSTSYG00000007359 Tarsius syrichta ENSTSYG00000007359 I 0.000
ENSSTOG00000025002 Ictidomys tridecemlineatus ENSSTOG00000025002 I 0.000
Sall4 Rattus norvegicus ENSRNOG00000050035 I 0.000
SALL4 Pteropus vampyrus ENSPVAG00000002075 I 0.000
SALL4 Pan troglodytes ENSPTRG00000013631 I 0.000
ENSPPYG00000011138 Pongo abelii ENSPPYG00000011138 I 0.000
ENSPANG00000021792 Papio anubis ENSPANG00000021792 I 0.000
SALL4 Ochotona princeps ENSOPRG00000011640 I 0.000
SALL4 Otolemur garnettii ENSOGAG00000013799 I 0.000
SALL4 Oryctolagus cuniculus ENSOCUG00000011797 I 0.000
ENSNLEG00000007013 Nomascus leucogenys ENSNLEG00000007013 I 0.000
ENSAMEG00000013250 Ailuropoda melanoleuca ENSAMEG00000013250 I 0.000
SALL4 Macaca mulatta ENSMMUG00000003870 I 0.000
ENSMLUG00000007060 Myotis lucifugus ENSMLUG00000007060 I 0.000
SALL4 Microcebus murinus ENSMICG00000000027 I 0.000
SALL4 Loxodonta africana ENSLAFG00000004309 I 0.000
SALL4 Gorilla gorilla ENSGGOG00000001832 I 0.000
SALL4 Felis catus ENSFCAG00000002822 I 0.000
SALL4 Erinaceus europaeus ENSEEUG00000003649 I 0.000
SALL4 Dasypus novemcinctus ENSDNOG00000040633 I 0.000
ENSCSAG00000015269 Chlorocebus sabaeus ENSCSAG00000015269 I 0.000
ENSCJAG00000000591 Callithrix jacchus ENSCJAG00000000591 I 0.000
ENSCAFG00000011738 Canis familiaris ENSCAFG00000011738 I 0.000
SALL4 Bos taurus ENSBTAG00000003101 I 0.000
SALL4 Equus caballus ENSECAG00000018533 N 0.000
ENSCJAG00000021107 Callithrix jacchus ENSCJAG00000021107 N 0.000
HelroG138365 Helobdella robusta HelroG138365 N 0.000