Thaps6935 (Thalassiosira pseudonana)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Thaps6935 T242275_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hsf2
M09231_2.00 		Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A 		0.328 0.301
HSF2
M03324_2.00 		Homo sapiens
GAANVTTCTAGAA
TTCTAGAABNTTC		 SELEX
Jolma et al.(2013)
HSF2_1 		0.326 0.301
HSF2
M02744_2.00 		Homo sapiens
GAABGTTCTRGA
TCYAGAACVTTC		 SELEX
Jolma et al.(2010)
HSF2_dimertrimer 		0.326 0.301
HSF2
M05505_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX 		0.326 0.301
HSF2
M05507_2.00 		Homo sapiens
VGAANNTTCBVGAAN
NTTCBVGAANNTTCB		 SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX 		0.326 0.301
HSF2
M09229_2.00 		Homo sapiens
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A 		0.326 0.301
HSF2
M10859_2.00 		Homo sapiens
VGAANNWTCB
VGAWNNTTCB		 Transfac
Matys et al.(2006)
V$HSF2_01 		0.326 0.301
HSF2
M10860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_02 		0.326 0.301
HSF2
M10861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_Q6 		0.326 0.301
HSF2
M05506_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX 		0.326 0.301
HSF2
M05508_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX 		0.326 0.301
hsf2
M02248_2.00 		Danio rerio
NNNWGTTCTATNN
NNATAGAACWNNN		 PBM
Weirauch et al.(2014)
pTH9010 		0.321 0.312
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps6935 HSF 160 270

Links

Other HSF family TFs
Other Thalassiosira pseudonana TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thaps6765 Thalassiosira pseudonana Thaps6765 N 0.440
Thaps6856 Thalassiosira pseudonana Thaps6856 N 0.381
Thaps1785 Thalassiosira pseudonana Thaps1785 N 0.375
Phatr3_J45666 Phaeodactylum tricornutum Phatr3_J45666 N 0.372
Mycgr3G45761 Zymoseptoria tritici Mycgr3G45761 I 0.362
e_gw1.8.1452.1 Mycosphaerella graminicola e_gw1.8.1452.1 I 0.362
estExt_fgenesh2_pg.C_90116 Fragilariopsis cylindrus estExt_fgenesh2_pg.C_90116 N 0.356
Phatr3_J35419 Phaeodactylum tricornutum Phatr3_J35419 N 0.351
Thaps9086 Thalassiosira pseudonana Thaps9086 N 0.342
Thapsdraft1071 Thalassiosira pseudonana Thapsdraft1071 N 0.336
Hsf2 Rattus norvegicus ENSRNOG00000000808 I 0.332
Thaps269238 Thalassiosira pseudonana Thaps269238 N 0.331
Hsf2 Mus musculus ENSMUSG00000019878 D 0.328
Hsf2 Dipodomys ordii ENSDORG00000012571 I 0.327
HSF2 Echinops telfairi ENSETEG00000006154 I 0.327
ENSAMEG00000007373 Ailuropoda melanoleuca ENSAMEG00000007373 I 0.326
HSF2 Bos taurus ENSBTAG00000012946 I 0.326
ENSCHOG00000010951 Choloepus hoffmanni ENSCHOG00000010951 I 0.326
HSF2 Callithrix jacchus ENSCJAG00000003956 I 0.326
HSF2 Cavia porcellus ENSCPOG00000007509 I 0.326
ENSCSAG00000005351 Chlorocebus sabaeus ENSCSAG00000005351 I 0.326
ENSCSAG00000016240 Chlorocebus sabaeus ENSCSAG00000016240 I 0.326
HSF2 Dasypus novemcinctus ENSDNOG00000031260 I 0.326
HSF2 Erinaceus europaeus ENSEEUG00000000435 I 0.326
HSF2 Homo sapiens ENSG00000025156 D 0.326
HSF2 Gorilla gorilla ENSGGOG00000023192 I 0.326
HSF2 Loxodonta africana ENSLAFG00000006440 I 0.326
ENSMICG00000006415 Microcebus murinus ENSMICG00000006415 I 0.326
HSF2 Myotis lucifugus ENSMLUG00000002355 I 0.326
HSF2 Macaca mulatta ENSMMUG00000007910 I 0.326
ENSMPUG00000014453 Mustela putorius furo ENSMPUG00000014453 I 0.326
ENSNLEG00000013721 Nomascus leucogenys ENSNLEG00000013721 I 0.326
ENSOARG00000008274 Ovis aries ENSOARG00000008274 I 0.326
HSF2 Oryctolagus cuniculus ENSOCUG00000025991 I 0.326
HSF2 Otolemur garnettii ENSOGAG00000015721 I 0.326
ENSPANG00000022516 Papio anubis ENSPANG00000022516 I 0.326
HSF2 Procavia capensis ENSPCAG00000016109 I 0.326
ENSPPYG00000016976 Pongo abelii ENSPPYG00000016976 I 0.326
HSF2 Pan troglodytes ENSPTRG00000018561 I 0.326
ENSTBEG00000013569 Tupaia belangeri ENSTBEG00000013569 I 0.326
ENSP00000357440-D1 Bos grunniens ENSP00000357440-D1 I 0.326
HSF2 Monodelphis domestica ENSMODG00000017753 I 0.322
ENSSHAG00000013467 Sarcophilus harrisii ENSSHAG00000013467 I 0.322
hsf2 Danio rerio ENSDARG00000053097 D 0.321
ENSONIG00000001677 Oreochromis niloticus ENSONIG00000001677 I 0.320