Ogr08841 (Ophisaurus gracilis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00605 (IRF) IPR001346 Ogr08841 T244568_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.951 0.951
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.931 0.931
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.931 0.931
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.931 0.931
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.931 0.931
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.931 0.931
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.931 0.931
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.931 0.931
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.931 0.931
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.931 0.931
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.775 0.775
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.775 0.775
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.775 0.775
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.775 0.775
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.775 0.775
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.775 0.775
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.775 0.775
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.775 0.775
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.775 0.775
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.775 0.775
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.775 0.775
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.775 0.775
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.775 0.775
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr08841 IRF 299 401

Links

Other IRF family TFs
Other Ophisaurus gracilis TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
IRF4 Homo sapiens ENSG00000137265 D 0.775
IRF8 Homo sapiens ENSG00000140968 D 0.931
Irf4 Mus musculus ENSMUSG00000021356 D 0.775
Irf8 Mus musculus ENSMUSG00000041515 D 0.951
IRF8 Anolis carolinensis ENSACAG00000005409 I 0.941
IRF4 Anolis carolinensis ENSACAG00000017711 I 0.784
ENSAMEG00000005976 Ailuropoda melanoleuca ENSAMEG00000005976 I 0.775
ENSAMEG00000018268 Ailuropoda melanoleuca ENSAMEG00000018268 I 0.923
ENSAMXG00000003452 Astyanax mexicanus ENSAMXG00000003452 I 0.853
ENSAMXG00000006093 Astyanax mexicanus ENSAMXG00000006093 I 0.755
ENSAMXG00000016370 Astyanax mexicanus ENSAMXG00000016370 I 0.765
ENSAPLG00000014646 Anas platyrhynchos ENSAPLG00000014646 I 0.784
IRF4 Bos taurus ENSBTAG00000002929 I 0.775
IRF8 Bos taurus ENSBTAG00000017824 I 0.951
IRF8 Canis familiaris ENSCAFG00000019919 I 0.923
IRF8 Callithrix jacchus ENSCJAG00000017331 I 0.941
IRF4 Callithrix jacchus ENSCJAG00000019524 I 0.775
IRF4 Cavia porcellus ENSCPOG00000003562 I 0.775
ENSCPOG00000027266 Cavia porcellus ENSCPOG00000027266 I 0.904
ENSCSAG00000003142 Chlorocebus sabaeus ENSCSAG00000003142 I 0.941
ENSCSAG00000007164 Chlorocebus sabaeus ENSCSAG00000007164 I 0.775
irf4a Danio rerio ENSDARG00000006560 I 0.765
irf10 Danio rerio ENSDARG00000027658 I 0.733
irf4b Danio rerio ENSDARG00000055374 I 0.743
irf8 Danio rerio ENSDARG00000056407 I 0.863
IRF8 Dasypus novemcinctus ENSDNOG00000038898 I 0.941
Irf4 Dipodomys ordii ENSDORG00000014895 I 0.775
IRF4 Equus caballus ENSECAG00000016808 I 0.775
IRF8 Erinaceus europaeus ENSEEUG00000002644 I 0.922
IRF4 Erinaceus europaeus ENSEEUG00000007703 I 0.706
IRF4 Echinops telfairi ENSETEG00000018472 I 0.775
ENSFALG00000005506 Ficedula albicollis ENSFALG00000005506 I 0.725
ENSFALG00000006647 Ficedula albicollis ENSFALG00000006647 I 0.885
ENSFALG00000013071 Ficedula albicollis ENSFALG00000013071 I 0.784
IRF8 Felis catus ENSFCAG00000007615 I 0.923
IRF4 Felis catus ENSFCAG00000022941 I 0.775
irf4b Gasterosteus aculeatus ENSGACG00000004966 I 0.755
irf8 Gasterosteus aculeatus ENSGACG00000015958 I 0.833
irf4a Gasterosteus aculeatus ENSGACG00000016461 I 0.735
IRF8 Gallus gallus ENSGALG00000005757 I 0.931
ENSGALG00000006448 Gallus gallus ENSGALG00000006448 I 0.725
ENSGALG00000012830 Gallus gallus ENSGALG00000012830 I 0.784
IRF4 Gorilla gorilla ENSGGOG00000012342 I 0.775
IRF8 Gorilla gorilla ENSGGOG00000028251 I 0.941
ENSGMOG00000003945 Gadus morhua ENSGMOG00000003945 I 0.856
ENSGMOG00000005047 Gadus morhua ENSGMOG00000005047 I 0.724
ENSGMOG00000016994 Gadus morhua ENSGMOG00000016994 I 0.784
ENSLACG00000004633 Latimeria chalumnae ENSLACG00000004633 I 0.706
ENSLACG00000005859 Latimeria chalumnae ENSLACG00000005859 I 0.873
ENSLACG00000007228 Latimeria chalumnae ENSLACG00000007228 I 0.745
IRF8 Loxodonta africana ENSLAFG00000010973 I 0.922
IRF4 Loxodonta africana ENSLAFG00000017235 I 0.775
ENSLOCG00000001013 Lepisosteus oculatus ENSLOCG00000001013 I 0.892
ENSLOCG00000003532 Lepisosteus oculatus ENSLOCG00000003532 I 0.745
ENSLOCG00000013008 Lepisosteus oculatus ENSLOCG00000013008 I 0.775
ENSMEUG00000002440 Macropus eugenii ENSMEUG00000002440 I 0.784
IRF8 Myotis lucifugus ENSMLUG00000005109 I 0.923
IRF4 Myotis lucifugus ENSMLUG00000010058 I 0.775
IRF8 Macaca mulatta ENSMMUG00000008125 I 0.941
IRF4 Macaca mulatta ENSMMUG00000018513 I 0.775
IRF8 Monodelphis domestica ENSMODG00000004572 I 0.931
IRF4 Monodelphis domestica ENSMODG00000008383 I 0.784
ENSMODG00000019483 Monodelphis domestica ENSMODG00000019483 I 0.725
ENSMPUG00000007848 Mustela putorius furo ENSMPUG00000007848 I 0.775
ENSMPUG00000008641 Mustela putorius furo ENSMPUG00000008641 I 0.931
ENSNLEG00000010631 Nomascus leucogenys ENSNLEG00000010631 I 0.775
ENSNLEG00000011429 Nomascus leucogenys ENSNLEG00000011429 I 0.941
IRF8 Ornithorhynchus anatinus ENSOANG00000003741 I 0.931
ENSOARG00000003822 Ovis aries ENSOARG00000003822 I 0.775
ENSOARG00000011513 Ovis aries ENSOARG00000011513 I 0.951
IRF8 Oryctolagus cuniculus ENSOCUG00000000536 I 0.923
IRF4 Oryctolagus cuniculus ENSOCUG00000009374 I 0.765
IRF8 Otolemur garnettii ENSOGAG00000009262 I 0.941
IRF4 Otolemur garnettii ENSOGAG00000014574 I 0.775
ENSONIG00000005631 Oreochromis niloticus ENSONIG00000005631 I 0.833
ENSONIG00000006398 Oreochromis niloticus ENSONIG00000006398 I 0.765
ENSONIG00000009637 Oreochromis niloticus ENSONIG00000009637 I 0.784
IRF8 Ochotona princeps ENSOPRG00000002139 I 0.931
IRF4 Ochotona princeps ENSOPRG00000012683 I 0.775
irf4b Oryzias latipes ENSORLG00000012712 I 0.755
irf4a Oryzias latipes ENSORLG00000017242 I 0.755
irf8 Oryzias latipes ENSORLG00000018216 I 0.833
ENSPANG00000024770 Papio anubis ENSPANG00000024770 I 0.941
IRF8 Procavia capensis ENSPCAG00000004460 I 0.922
ENSPFOG00000000657 Poecilia formosa ENSPFOG00000000657 I 0.765
ENSPFOG00000015506 Poecilia formosa ENSPFOG00000015506 I 0.784
ENSPFOG00000017639 Poecilia formosa ENSPFOG00000017639 I 0.843
ENSPPYG00000007620 Pongo abelii ENSPPYG00000007620 I 0.941
ENSPPYG00000016161 Pongo abelii ENSPPYG00000016161 I 0.775
ENSPSIG00000011619 Pelodiscus sinensis ENSPSIG00000011619 I 0.775
ENSPSIG00000011788 Pelodiscus sinensis ENSPSIG00000011788 I 0.923
IRF8 Pan troglodytes ENSPTRG00000008435 I 0.941
IRF4 Pan troglodytes ENSPTRG00000017656 I 0.775
IRF8 Pteropus vampyrus ENSPVAG00000003758 I 0.923
IRF4 Pteropus vampyrus ENSPVAG00000005078 I 0.775
Irf8 Rattus norvegicus ENSRNOG00000017869 I 0.922
Irf4 Rattus norvegicus ENSRNOG00000061070 I 0.775
ENSSHAG00000006901 Sarcophilus harrisii ENSSHAG00000006901 I 0.931
ENSSHAG00000012864 Sarcophilus harrisii ENSSHAG00000012864 I 0.706
ENSSHAG00000015592 Sarcophilus harrisii ENSSHAG00000015592 I 0.784
ENSSSCG00000023184 Sus scrofa ENSSSCG00000023184 I 0.814
ENSSTOG00000011470 Ictidomys tridecemlineatus ENSSTOG00000011470 I 0.775
ENSSTOG00000028363 Ictidomys tridecemlineatus ENSSTOG00000028363 I 0.941
IRF4 Tupaia belangeri ENSTBEG00000012240 I 0.775
IRF8 Tupaia belangeri ENSTBEG00000013828 I 0.922
IRF4 Taeniopygia guttata ENSTGUG00000002144 I 0.784
ENSTGUG00000006609 Taeniopygia guttata ENSTGUG00000006609 I 0.725
irf4a Tetraodon nigroviridis ENSTNIG00000005370 I 0.755
irf4b Tetraodon nigroviridis ENSTNIG00000008222 I 0.775
irf8 Tetraodon nigroviridis ENSTNIG00000009283 I 0.833
irf4b Takifugu rubripes ENSTRUG00000002946 I 0.765
irf4a Takifugu rubripes ENSTRUG00000011568 I 0.752
irf8 Takifugu rubripes ENSTRUG00000018213 I 0.843
IRF4 Tursiops truncatus ENSTTRG00000001849 I 0.784
ENSXMAG00000003082 Xiphophorus maculatus ENSXMAG00000003082 I 0.853
ENSXMAG00000006246 Xiphophorus maculatus ENSXMAG00000006246 I 0.765
ENSXMAG00000017015 Xiphophorus maculatus ENSXMAG00000017015 I 0.784
Aan_R009222 Calypte anna Aan_R009222 I 0.912
Aan_R012662 Calypte anna Aan_R012662 I 0.784
Afo_R010468 Aptenodytes forsteri Afo_R010468 I 0.702
Afo_R011419 Aptenodytes forsteri Afo_R011419 I 0.913
Afo_R014746 Aptenodytes forsteri Afo_R014746 I 0.784
Alligator_sinensis_CCG008430.1 Alligator sinensis Alligator_sinensis_CCG008430.1 I 0.923
Alligator_sinensis_CCG015622.1 Alligator sinensis Alligator_sinensis_CCG015622.1 I 0.784
Brh_R000433 Buceros rhinoceros Brh_R000433 I 0.794
Brh_R009589 Buceros rhinoceros Brh_R009589 I 0.941
Cmyd_10011521 Chelonia mydas Cmyd_10011521 I 0.784
Cmyd_10021085 Chelonia mydas Cmyd_10021085 I 0.923
ENSP00000268638-D1 Bos grunniens ENSP00000268638-D1 I 0.951
ENSP00000268638 Macaca fascicularis ENSP00000268638 I 0.941
ENSP00000370343-D1 Bos grunniens ENSP00000370343-D1 I 0.775
ENSP00000370343 Macaca fascicularis ENSP00000370343 I 0.712
Gfo_R000501 Geospiza fortis Gfo_R000501 I 0.902
Gfo_R003357 Geospiza fortis Gfo_R003357 I 0.784
Myotis_brandtii_Irf4_10020370 Myotis brandtii Myotis_brandtii_Irf4_10020370 I 0.735
Myotis_brandtii_IRF8_10035313 Myotis brandtii Myotis_brandtii_IRF8_10035313 I 0.923
Ogr05775 Ophisaurus gracilis Ogr05775 I 0.784
Pvit_05673 Pogona vitticeps Pvit_05673 I 0.752
Pvit_16863 Pogona vitticeps Pvit_16863 I 0.941
Tal_R007108 Tyto alba Tal_R007108 I 0.913
Tal_R010571 Tyto alba Tal_R010571 I 0.707
irf8.L Xenopus laevis XB-GENE-985949 I 0.902
irf4 Xenopus tropicalis XB-GENE-988321 I 0.735