CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GLYMA04G37900
(
Glycine max
)
Leafy
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01698 (FLO_LFY)
IPR002910
GLYMA04G37900
T244703_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LFY
M02692_2.00
Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR
SELEX
Mathelier et al.(2014)
MA0590.1
0.828
0.828
LFY
M10895_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$LFY_Q2
0.828
0.828
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA04G37900.2
Leafy
1
182
MDPDAFTASLFKWDPRTVLPPAPAPPPRPSLLEYAMAPPPVTTAFHPARTAAPRELGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRVEDDDIKRRNNNSNNLLSTDTTTNALDALSQEGLSEEPVVQGETEAEGSGGRSTT
GLYMA04G37900.2
Leafy
179
337
RSTTPFIVTDPGEVARGKKNGLDYLFHLYEQCREFLMQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSVS
Links
Other
Leafy
family TFs
Other
Glycine max
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MCYG_04265
Microsporum canis
MCYG_04265
N
0.000
SPPG_00605
Spizellomyces punctatus
SPPG_00605
N
0.000
BAUCODRAFT_130166
Baudoinia compniacensis
BAUCODRAFT_130166
N
0.000
ANIA_06293
Aspergillus nidulans
CADANIAG00010534
N
0.000
DOTSEDRAFT_66782
Dothistroma septosporum
DOTSEDRAFT_66782
N
0.000
EURHEDRAFT_513555
Aspergillus ruber
EURHEDRAFT_513555
N
0.000
HMPREF1541_02999
Cyphellophora europaea
HMPREF1541_02999
N
0.000
M438DRAFT_275275
Aureobasidium pullulans
M438DRAFT_275275
N
0.000
MYCFIDRAFT_56164
Pseudocercospora fijiensis
MYCFIDRAFT_56164
N
0.000
Mycgr3G77753
Zymoseptoria tritici
Mycgr3G77753
N
0.000
SEPMUDRAFT_145522
Sphaerulina musiva
SEPMUDRAFT_145522
N
0.000
TESG_01285
Trichophyton tonsurans
TESG_01285
N
0.000
estExt_Genewise1Plus.C_20247
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_20247
N
0.000
estExt_Genewise1Plus.C_chr_130174
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_130174
N
0.000
fgeneshPB_pg.14__231
Phycomyces blakesleeanus
fgeneshPB_pg.14__231
N
0.000