CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_043_00044
(
Aquilegia coerulea
)
Leafy
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01698 (FLO_LFY)
IPR002910
Aquca_043_00044
T244779_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LFY
M02692_2.00
Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR
SELEX
Mathelier et al.(2014)
MA0590.1
0.780
0.780
LFY
M10895_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$LFY_Q2
0.780
0.780
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_043_00044.1
Leafy
1
385
MDPEAFSAASLYKWERAAAAAAAPQHHHRLQFEPMALPPSPPPPQPSLPSYCVTRPPRELLLTLEDFFQPYGIRYTMIAKIAELGFTVSTLLDMRDEELDEMMITLSQIVRLDLLVGEKYGIKAAIRAERRRYHVLLGGGAAGGHVDNTTNPLDALSQGGLSEEPVMKEAAGSGGGTWDMVSAGEKRKKKNKAQRSRKARNSGDENYDDEDDEEDAAGERGCGRHRQREHPFVVTEPGEVARGKKNGLDYLFHLYEECRQYLIQVQNIAKDRGEKCPTKVTNQVYRHAIQAGATHINKPKIRHYVHCYALHCLDEEASNALRKAFKDRGENVGAWRQACYEPLVKFASDHHYDIDCIFNDHPRLSIWYVPTKLRKLCHAQRNNVA
Links
Other
Leafy
family TFs
Other
Aquilegia coerulea
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000002769
Astyanax mexicanus
ENSAMXG00000002769
N
0.000
ENSCSAG00000000974
Chlorocebus sabaeus
ENSCSAG00000000974
N
0.000
ZNF683
Homo sapiens
ENSG00000176083
N
0.000
ZNF683
Gorilla gorilla
ENSGGOG00000007713
N
0.000
ZNF683
Macaca mulatta
ENSMMUG00000003420
N
0.000
ENSONIG00000013583
Oreochromis niloticus
ENSONIG00000013583
N
0.000
ENSORLG00000010025
Oryzias latipes
ENSORLG00000010025
N
0.000
ENSPANG00000022867
Papio anubis
ENSPANG00000022867
N
0.000
ENSPPYG00000001685
Pongo abelii
ENSPPYG00000001685
N
0.000
ZNF683
Pan troglodytes
ENSPTRG00000000383
N
0.000
ENSTRUG00000005618
Takifugu rubripes
ENSTRUG00000005618
N
0.000