CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.K02192
(
Eucalyptus grandis
)
Leafy
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01698 (FLO_LFY)
IPR002910
Eucgr.K02192
T244784_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LFY
M02692_2.00
Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR
SELEX
Mathelier et al.(2014)
MA0590.1
0.821
0.821
LFY
M10895_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$LFY_Q2
0.821
0.821
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.K02192.1
Leafy
2
337
DPEAFAVVGLRTMGGLEELFEAYGIRYLTASRIAEMGFTANTLLDMKEEELDDMMNSLSHIFRWDLLVGERYGIKAAIRAERRRLLEADDRRHHLHSTDHALLDALSHKGLSEEQVMQHSEKDQLGRAGSGDTAGTSWGAQQQRKKHRHRHRITAMKGAATEEDEEDEEEVEEMRRQREHPFIVTEPGEVARGKKNGLDYLFHLYDQCRDFLLQVQSLAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEHASNALRKSFKERGENVGAWRQACYHPLVTIAGRRAGWDIDAIFNAHPRLCIWYVPTKLRQLCHAHRHSSA
Links
Other
Leafy
family TFs
Other
Eucalyptus grandis
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Mecp2
Mus musculus
ENSMUSG00000031393
D
0.000
MECP2
Homo sapiens
ENSG00000169057
D
0.000
ENSSTOG00000006094
Ictidomys tridecemlineatus
ENSSTOG00000006094
I
0.000
MECP2
Otolemur garnettii
ENSOGAG00000015115
I
0.000
ENSONIG00000000809
Oreochromis niloticus
ENSONIG00000000809
I
0.000
mecp2
Oryzias latipes
ENSORLG00000020117
I
0.000
ENSPANG00000011691
Papio anubis
ENSPANG00000011691
I
0.000
MECP2
Procavia capensis
ENSPCAG00000011826
I
0.000
ENSPFOG00000002307
Poecilia formosa
ENSPFOG00000002307
I
0.000
ENSPPYG00000020866
Pongo abelii
ENSPPYG00000020866
I
0.000
ENSPSIG00000002254
Pelodiscus sinensis
ENSPSIG00000002254
I
0.000
MECP2
Pan troglodytes
ENSPTRG00000022424
I
0.000
Mecp2
Rattus norvegicus
ENSRNOG00000056659
I
0.000
MECP2
Sorex araneus
ENSSARG00000012925
I
0.000
ENSSHAG00000007851
Sarcophilus harrisii
ENSSHAG00000007851
I
0.000
ENSSSCG00000012796
Sus scrofa
ENSSSCG00000012796
I
0.000
ENSOARG00000005806
Ovis aries
ENSOARG00000005806
I
0.000
mecp2
Tetraodon nigroviridis
ENSTNIG00000005114
I
0.000
mecp2
Takifugu rubripes
ENSTRUG00000006419
I
0.000
ENSTSYG00000007420
Tarsius syrichta
ENSTSYG00000007420
I
0.000
MECP2
Tursiops truncatus
ENSTTRG00000004653
I
0.000
ENSXMAG00000003522
Xiphophorus maculatus
ENSXMAG00000003522
I
0.000
Cmyd_10000498
Chelonia mydas
Cmyd_10000498
I
0.000
ENSP00000395535-D1
Bos grunniens
ENSP00000395535-D1
I
0.000
ENSP00000395535
Macaca fascicularis
ENSP00000395535
I
0.000
Myotis_brandtii_IRAK1_10010673
Myotis brandtii
Myotis_brandtii_IRAK1_10010673
I
0.000
Ogr09995
Ophisaurus gracilis
Ogr09995
I
0.000
Pvit_16673
Pogona vitticeps
Pvit_16673
I
0.000
mecp2
Xenopus tropicalis
XB-GENE-494740
I
0.000
mecp2.S
Xenopus laevis
XB-GENE-494744
I
0.000
mecp2
Gasterosteus aculeatus
ENSGACG00000000798
I
0.000
ENSAMEG00000018448
Ailuropoda melanoleuca
ENSAMEG00000018448
I
0.000
ENSAMXG00000017019
Astyanax mexicanus
ENSAMXG00000017019
I
0.000
MECP2
Bos taurus
ENSBTAG00000047855
I
0.000
MECP2
Canis familiaris
ENSCAFG00000019440
I
0.000
MECP2
Callithrix jacchus
ENSCJAG00000016796
I
0.000
MECP2
Cavia porcellus
ENSCPOG00000012579
I
0.000
ENSCSAG00000006798
Chlorocebus sabaeus
ENSCSAG00000006798
I
0.000
mecp2
Danio rerio
ENSDARG00000014218
I
0.000
MECP2
Dasypus novemcinctus
ENSDNOG00000013419
I
0.000
Mecp2
Dipodomys ordii
ENSDORG00000014978
I
0.000
MECP2
Equus caballus
ENSECAG00000018208
I
0.000
ENSEEUG00000015025
Erinaceus europaeus
ENSEEUG00000015025
I
0.000
MECP2
Felis catus
ENSFCAG00000011389
I
0.000
MECP2
Oryctolagus cuniculus
ENSOCUG00000013147
I
0.000
MECP2
Gorilla gorilla
ENSGGOG00000000222
I
0.000
ENSLACG00000011281
Latimeria chalumnae
ENSLACG00000011281
I
0.000
MECP2
Loxodonta africana
ENSLAFG00000016292
I
0.000
ENSLOCG00000014725
Lepisosteus oculatus
ENSLOCG00000014725
I
0.000
ENSMEUG00000002761
Macropus eugenii
ENSMEUG00000002761
I
0.000
MECP2
Microcebus murinus
ENSMICG00000005149
I
0.000
MECP2
Myotis lucifugus
ENSMLUG00000014297
I
0.000
MECP2
Macaca mulatta
ENSMMUG00000018704
I
0.000
MECP2
Monodelphis domestica
ENSMODG00000011643
I
0.000
ENSMPUG00000009072
Mustela putorius furo
ENSMPUG00000009072
I
0.000
ENSNLEG00000013783
Nomascus leucogenys
ENSNLEG00000013783
I
0.000
MECP2
Ornithorhynchus anatinus
ENSOANG00000011024
I
0.000
MECP2
Anolis carolinensis
ENSACAG00000012519
I
0.000